RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 HDAC8Q9BY41 377 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 CDC42EP4Q9H3Q1 356 aaKnown RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 SLC2A6Q9UGQ3 507 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 TECTAO75443 2155 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 HEATR9A2RTY3 570 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 PRR23AA6NEV1 266 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 NEMP1O14524 444 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 EIF3HO15372 352 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP39-218ENST00000493829 CLDN7O95471 211 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 VIPR1P32241 457 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 MMP12P39900 470 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 BRD3Q15059 726 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 MAP9Q49MG5 647 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 PCID2Q5JVF3 399 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 HCAR2Q8TDS4 363 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP39-218ENST00000493829 SPOCK2Q92563 424 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 TPSD1Q9BZJ3 242 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 MAGEE1Q9HCI5 957 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 BPIFA1Q9NP55 256 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 NINJ2Q9NZG7 142 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 SOX13Q9UN79 622 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 MUC3AQ02505 3323 aa19.42■□□□□ 0.7
USP39-218ENST00000493829 LDB2O43679 373 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 ERLIN1O75477 346 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 ACSL3O95573 720 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 CYP2A6P11509 494 aaPredicted RBP19.41■□□□□ 0.7
USP39-218ENST00000493829 PGAM1P18669 254 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 ADRA1DP25100 572 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 NMBRP28336 390 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 PMS2P54278 862 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 SLMAPQ14BN4 828 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 KYNUQ16719 465 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 EMBQ6PCB8 327 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 CEP128Q6ZU80 1094 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 TTC30BQ8N4P2 665 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 OR13C4Q8NGS5 318 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 UHMK1Q8TAS1 419 aaKnown RBP19.41■□□□□ 0.7
USP39-218ENST00000493829 BRSK1Q8TDC3 778 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 PBXIP1Q96AQ6 731 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 MFSD3Q96ES6 412 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 PHACTR1Q9C0D0 580 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 TSPYL1Q9H0U9 437 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 SEMA4AQ9H3S1 761 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 VPS37BQ9H9H4 285 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 SPATA6Q9NWH7 488 aaPredicted RBP19.41■□□□□ 0.7
USP39-218ENST00000493829 IL1RAPL1Q9NZN1 696 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 RPS6KL1Q9Y6S9 549 aa19.41■□□□□ 0.7
USP39-218ENST00000493829 CCDC151A5D8V7 595 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 ALDH1A2O94788 518 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 CRTAMO95727 393 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 AOC1P19801 751 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 RALGDSQ12967 914 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 ARHGEF7Q14155 803 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 TAF1AQ15573 450 aaPredicted RBP19.4■□□□□ 0.7
USP39-218ENST00000493829 CNGA3Q16281 694 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 FBXO38Q6PIJ6 1188 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 UNC5AQ6ZN44 842 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 DPPA4Q7L190 304 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 PALM2Q8IXS6 379 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 UBLCP1Q8WVY7 318 aaPredicted RBP19.4■□□□□ 0.7
USP39-218ENST00000493829 LRRC39Q96DD0 335 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 DNAJC1Q96KC8 554 aaKnown RBP19.4■□□□□ 0.7
USP39-218ENST00000493829 RANBP9Q96S59 729 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 ZFYVE1Q9HBF4 777 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 HACD3Q9P035 362 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 DLGAP2Q9P1A6 1054 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 PPIL1Q9Y3C6 166 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 FAM47DPA6NHR8 397 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 NFKBIAP25963 317 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 SSTR1P30872 391 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 TPMTP51580 245 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 ZNF140P52738 457 aaPredicted RBP19.4■□□□□ 0.7
USP39-218ENST00000493829 TAS2R38P59533 333 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 CDKN3Q16667 212 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 OR4K2Q8NGD2 314 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 OR14C36Q8NHC7 312 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 CAVIN3Q969G5 261 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 EID2BQ96D98 161 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 FCRL3Q96P31 734 aaPredicted RBP19.4■□□□□ 0.7
USP39-218ENST00000493829 KIFC1Q9BW19 673 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 TXLNGYQ9BZA5 131 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 NCKAP1Q9Y2A7 1128 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 FADS3Q9Y5Q0 445 aa19.4■□□□□ 0.7
USP39-218ENST00000493829 SCN8AQ9UQD0 1980 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 MROH6A6NGR9 719 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 C2orf81A6NN90 581 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 AREL1O15033 823 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 APBB3O95704 486 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 C1SP09871 688 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 ELFN1P0C7U0 828 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 GPX6P59796 221 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 ZBTB16Q05516 673 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 ELP6Q0PNE2 266 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 CRYMQ14894 314 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 TSTD2Q5T7W7 516 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 ESRP1Q6NXG1 681 aaKnown RBP19.39■□□□□ 0.69
USP39-218ENST00000493829 UNC5BQ8IZJ1 945 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 LYSMD1Q96S90 227 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 TRABDQ9H4I3 376 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms