RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 C16orf72Q14CZ0 275 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 AMZ1Q400G9 498 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 DNAJC24Q6P3W2 148 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 LIPIQ6XZB0 460 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 C3orf20Q8ND61 904 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 JPH3Q8WXH2 748 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 VPS16Q9H269 839 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 CLSTN2Q9H4D0 955 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 LRRC19Q9H756 370 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 ATP13A3Q9H7F0 1226 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
SAMM50-205ENST00000493621 RDH14Q9HBH5 336 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 COL12A1Q99715 3063 aa12.38□□□□□ -0.43
SAMM50-205ENST00000493621 FLNCQ14315 2725 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 PRSS38A1L453 326 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 CFAP69A5D8W1 941 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 EPHB6O15197 1021 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 TEX33O43247 280 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 B4GAT1O43505 415 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 PALMO75781 387 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 CCL4P13236 92 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 CD82P27701 267 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 STAT1P42224 750 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 NDST2P52849 883 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 OR1D5P58170 312 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 ACOX1Q15067 660 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 TMEM164Q5U3C3 297 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 DPPA4Q7L190 304 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 PIM3Q86V86 326 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 PELI3Q8N2H9 469 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 KIAA1524Q8TCG1 905 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 MCEEQ96PE7 176 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 SPATS2LQ9NUQ6 558 aaKnown RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 AKAP7Q9P0M2 348 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 ZFC3H1O60293 1989 aaKnown RBP12.37□□□□□ -0.43
SAMM50-205ENST00000493621 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
SAMM50-205ENST00000493621 TCRBV5S1A1TA0A578 114 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 RHPN2P1A8MT19 583 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CPNE6O95741 557 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 GM2AP17900 193 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 ALDH4A1P30038 563 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 TRIM23P36406 574 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CSNK1DP48730 415 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 AIF1P55008 147 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 BCL2L1Q07817 233 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CLCA4Q14CN2 919 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 SYCP1Q15431 976 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
SAMM50-205ENST00000493621 AFMIDQ63HM1 303 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 PNCKQ6P2M8 343 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 MON1BQ7L1V2 547 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 RCBTB1Q8NDN9 531 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 ZDHHC1Q8WTX9 485 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 ECHDC3Q96DC8 303 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 NUDT22Q9BRQ3 303 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CNPY3Q9BT09 278 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CINPQ9BW66 212 aaPredicted RBP12.36□□□□□ -0.43
SAMM50-205ENST00000493621 CARS2Q9HA77 564 aaKnown RBP12.36□□□□□ -0.43
SAMM50-205ENST00000493621 DOPEY2Q9Y3R5 2298 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 PDE2AO00408 941 aaPredicted RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 EEF2KO00418 725 aaKnown RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 FGF1P05230 155 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 MYCLP1P12525 358 aaPredicted RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 CCNB1P14635 433 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 HTR7P34969 479 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 POLR2LP62875 67 aaKnown RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 OGDHQ02218 1023 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 KRT31Q15323 416 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 COLEC12Q5KU26 742 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 DCUN1D2Q6PH85 259 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 GPBAR1Q8TDU6 330 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 GSDMCQ9BYG8 508 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 B3GNT4Q9C0J1 378 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms