RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ILVBLA1L0T0 632 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 C16orf96A6NNT2 1141 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 D6RAR5 112 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 NVLO15381 856 aaKnown RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 COQ9O75208 318 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 ERBB2P04626 1255 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 ANXA6P08133 673 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 LIPCP11150 499 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 OR1E1P30953 314 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 GKP32189 559 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 CCKBRP32239 447 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 LSP1P33241 339 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 MAGEA8P43361 318 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 THOP1P52888 689 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 SETDB1Q15047 1291 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 TBR1Q16650 682 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 BRMS1LQ5PSV4 323 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 TTI2Q6NXR4 508 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 ZNF574Q6ZN55 896 aaPredicted RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 SLC26A9Q7LBE3 791 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 MREGQ8N565 214 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 EIF1ADQ8N9N8 165 aaKnown RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 KYQ8NBH2 561 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 RAB7BQ96AH8 199 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 DHTKD1Q96HY7 919 aaPredicted RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 C1orf74Q96LT6 269 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 ARHGAP9Q9BRR9 750 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 TSGA10Q9BZW7 698 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 WDCPQ9H6R7 721 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 SYNDIG1Q9H7V2 258 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 CHCHD3Q9NX63 227 aaKnown RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 FCF1Q9Y324 198 aaKnown RBP13.27□□□□□ -0.29
HDAC3-213ENST00000492506 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
HDAC3-213ENST00000492506 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 AREL1O15033 823 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 VAV2P52735 878 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 YPEL5P62699 121 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 CCL7P80098 99 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 SLC6A3Q01959 620 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 RETSATQ6NUM9 610 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ESRP1Q6NXG1 681 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 GJB7Q6PEY0 223 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ZNF783Q6ZMS7 281 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 MACC1Q6ZN28 852 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 JAMLQ86YT9 394 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 PASD1Q8IV76 773 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 SDR16C5Q8N3Y7 309 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ARL10Q8N8L6 244 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 NOA1Q8NC60 698 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 HTR3CQ8WXA8 447 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 CCDC74AQ96AQ1 378 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 SPON2Q9BUD6 331 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 SLC13A1Q9BZW2 595 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 CENPHQ9H3R5 247 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ZDHHC6Q9H6R6 413 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 WDR70Q9NW82 654 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 NOP53Q9NZM5 478 aaKnown RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 HECAQ9UBI9 543 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
HDAC3-213ENST00000492506 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-213ENST00000492506 C5orf60A6NFR6 353 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 BIN1O00499 593 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PSMA7O14818 248 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 BUB1BO60566 1050 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 RPLP0P05388 317 aaKnown RBP13.25□□□□□ -0.29
HDAC3-213ENST00000492506 SFTPCP11686 197 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 EIF4A3P38919 411 aaKnown RBP13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PBX1P40424 430 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 DNA2P51530 1060 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 INHBCP55103 352 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
HDAC3-213ENST00000492506 CYP4F2P78329 520 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PPARDQ03181 441 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 CLCA4Q14CN2 919 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 ZNF805Q5CZA5 627 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 FAXCQ5TGI0 409 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 FOXR2Q6PJQ5 311 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 SLC30A9Q6PML9 568 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 LVRNQ6Q4G3 990 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 VASH2Q86V25 355 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 DTX1Q86Y01 620 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 TP53I13Q8NBR0 393 aaPredicted RBP13.25□□□□□ -0.29
HDAC3-213ENST00000492506 OR6K2Q8NGY2 324 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
HDAC3-213ENST00000492506 ISG20Q96AZ6 181 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms