RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ITGB7P26010 798 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 CXCR5P32302 372 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZBTB17Q13105 803 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 COL9A2Q14055 689 aaPredicted RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 TMEM259Q4ZIN3 620 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 ARSIQ5FYB1 569 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 PAPD7Q5XG87 772 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZC3H18Q86VM9 953 aaKnown RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 SLC25A45Q8N413 288 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 HCAR2Q8TDS4 363 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 HTR3CQ8WXA8 447 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 HDAC8Q9BY41 377 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZDHHC6Q9H6R6 413 aa15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 RBM22Q9NW64 420 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDC42SE1-205ENST00000491825 ADAMTS20P59510 1910 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 TSPAN11A1L157 253 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 CTAGE9A4FU28 777 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 TRIM38O00635 465 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 FANCGO15287 622 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SLC31A1O15431 190 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 CEP104O60308 925 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SOCS5O75159 536 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 FGGP02679 453 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 HLA-DQB2P05538 268 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 THEGLP0DJG4 465 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 GIMD1P0DJR0 217 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 PTPN3P26045 913 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 HNF1BP35680 557 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ETF1P62495 437 aaKnown RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 WASHC5Q12768 1159 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ILKQ13418 452 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SIX1Q15475 284 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SLC14A2Q15849 920 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 TEX44Q53QW1 395 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZNF805Q5CZA5 627 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 HES3Q5TGS1 186 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SEL1L3Q68CR1 1132 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 GDPD4Q6W3E5 623 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 GCNT7Q6ZNI0 430 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ERN2Q76MJ5 926 aaKnown RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SRLQ86TD4 932 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 SLC22A18ASQ8N1D0 253 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 RYBPQ8N488 228 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 CNTD1Q8N815 330 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 OR13H1Q8NG92 308 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 LRRN4Q8WUT4 740 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 HNRNPLLQ8WVV9 542 aaKnown RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 KLHDC7BQ96G42 594 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ZNF641Q96N77 438 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 MYOCQ99972 504 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 FERMT1Q9BQL6 677 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 ATP13A3Q9H7F0 1226 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 CAAP1Q9H8G2 361 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 NT5MQ9NPB1 228 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 FZD3Q9NPG1 666 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 GPR27Q9NS67 375 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 DKK3Q9UBP4 350 aa15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 R3HDM2Q9Y2K5 976 aaKnown RBP15.11■□□□□ 0.01
CDC42SE1-205ENST00000491825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 H7C0C1 242 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 INSIG1O15503 277 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 SIGLEC6O43699 453 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 NEBLO76041 1014 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 JCHAINP01591 159 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 JUPP14923 745 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 CKMT2P17540 419 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 HNRNPA2B1P22626 353 aaKnown RBP15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 ACP1P24666 158 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 SERPINA4P29622 427 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 ATP5OP48047 213 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 SCNN1BP51168 640 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 MAXP61244 160 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 CCDC15Q0P6D6 951 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 TARDBPQ13148 414 aaKnown RBP eCLIP15.1■□□□□ 0.018e-6■■■□□ 18.9
CDC42SE1-205ENST00000491825 SOWAHCQ53LP3 525 aaPredicted RBP15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 DRICH1Q6PGQ1 229 aaPredicted RBP15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 ABI3BPQ7Z7G0 1075 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 ACTRT1Q8TDG2 376 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 KLK6Q92876 244 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 ECHDC3Q96DC8 303 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 NXPE2Q96DL1 559 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 TEKT5Q96M29 485 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 DYRK4Q9NR20 520 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 HOMER3Q9NSC5 361 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 TRHDEQ9UKU6 1024 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 IGSF10Q6WRI0 2623 aa15.1■□□□□ 0.01
CDC42SE1-205ENST00000491825 BAHCC1Q9P281 2608 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 A0A1W2PQ67 120 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 CFAP69A5D8W1 941 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 TRAFD1O14545 582 aaPredicted RBP15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 HTRA2O43464 458 aaPredicted RBP15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 LIASO43766 372 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 PIGNO95427 931 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 UGT2B4P06133 528 aa15.09■□□□□ 0.01
CDC42SE1-205ENST00000491825 ADRB3P13945 408 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms