RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502		A0A1W2PQ67	120 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	TLDC2	A0PJX2	215 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	HEATR9	A2RTY3	570 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	SNAP91	O60641	907 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	USP1	O94782	785 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	AGT	P01019	485 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	SRPRA	P08240	638 aa	Known RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ACADM	P11310	421 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	BCKDHB	P21953	392 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ADRA1D	P25100	572 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	MPL	P40238	635 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	MSH2	P43246	934 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ID4	P47928	161 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	DHPS	P49366	369 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	VASP	P50552	380 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	SKOR1	P84550	965 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ECT2L	Q008S8	904 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	CREB5	Q02930	508 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	NIPAL4	Q0D2K0	466 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ILF2	Q12905	390 aa	Known RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	CAMK2G	Q13555	558 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	PCSK7	Q16549	785 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	STEAP4	Q687X5	459 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	LEKR1	Q6ZMV7	388 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	PRR23C	Q6ZRP0	262 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	SRL	Q86TD4	932 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	TMPRSS6	Q8IU80	811 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	NDUFAF2	Q8N183	169 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	PGBD5	Q8N414	524 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ARFGAP2	Q8N6H7	521 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	PCDH20	Q8N6Y1	951 aa	Known RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	UHMK1	Q8TAS1	419 aa	Known RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	CYB5D2	Q8WUJ1	264 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	SIPA1	Q96FS4	1042 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ATP6V1G3	Q96LB4	118 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	RANBP9	Q96S59	729 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	GORASP1	Q9BQQ3	440 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	ITM2C	Q9NQX7	267 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	NSMCE4A	Q9NXX6	385 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	MBD1	Q9UIS9	605 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	HS3ST2	Q9Y278	367 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	THADA	Q6YHU6	1953 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	CFAP54	Q96N23	3096 aa		13.57	□□□□□ -0.24
NUP188-208	ENST00000491502	PLXND1	Q9Y4D7	1925 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	LOC285095	A0A1B0GVY8	99 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	NDUFS2	O75306	463 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	USP12	O75317	370 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	NDST3	O95803	873 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SYF2	O95926	243 aa	Known RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	GSR	P00390	522 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SHBG	P04278	402 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	GLDC	P23378	1020 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PRKCH	P24723	683 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	NFKBIA	P25963	317 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	OXTR	P30559	389 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SSTR1	P30872	391 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	GRIA1	P42261	906 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	RECQL	P46063	649 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	GPX6	P59796	221 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	RPL26	P61254	145 aa	Known RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PDE1B	Q01064	536 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SLC1A5	Q15758	541 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PTPRN	Q16849	979 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PLA2G2C	Q5R387	149 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	LINGO4	Q6UY18	593 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	CAPN12	Q6ZSI9	719 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	CYP2U1	Q7Z449	544 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PLPP6	Q8IY26	295 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	APCDD1	Q8J025	514 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PAF1	Q8N7H5	531 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	OR2T3	Q8NH03	318 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	OR2W6P	Q8NHA6	318 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	FBF1	Q8TES7	1133 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	KIFC1	Q9BW19	673 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	ATP13A3	Q9H7F0	1226 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	NOD2	Q9HC29	1040 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SYBU	Q9NX95	663 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SENP1	Q9P0U3	644 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	VPS18	Q9P253	973 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	INTS6	Q9UL03	887 aa	Known RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	SOX13	Q9UN79	622 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	RPL26L1	Q9UNX3	145 aa	Known RBP	13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	ERVW-1	Q9UQF0	538 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	RPS6KL1	Q9Y6S9	549 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	FAM169A	Q9Y6X4	670 aa		13.56	□□□□□ -0.24
NUP188-208	ENST00000491502	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	IQANK1	A0A1B0GTG1	560 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	TCRBV9S1A1T	A0A576	114 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	ATP9B	O43861	1147 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	BANF1	O75531	89 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	MMP2	P08253	660 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	INHBA	P08476	426 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	C7	P10643	843 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	HLA-E	P13747	358 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	CR2	P20023	1033 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	OAS2	P29728	719 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms