RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 KLC2Q9H0B6 622 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 LRRC19Q9H756 370 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.43□□□□□ -0.74
TTC28-207ENST00000490475 ETNK2Q9NVF9 386 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 INTUQ9ULD6 942 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 PADI4Q9UM07 663 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ITM2BQ9Y287 266 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ATP8A1Q9Y2Q0 1164 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 PCDHB1Q9Y5F3 818 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 U3KQA8 63 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 LOC400499M0QZD8 3231 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 RCCD1A6NED2 376 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 CACNB4O00305 520 aaPredicted RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 TNFRSF10CO14798 259 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 MUSKO15146 869 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 YY2O15391 372 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 NDUFA10O95299 355 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TNFP01375 233 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 HOXC4P09017 264 aaPredicted RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 CD48P09326 243 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 KRT10P13645 584 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 C6P13671 934 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TSHRP16473 764 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 AMPD1P23109 780 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 IL4RP24394 825 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 GJC1P36383 396 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 MMP12P39900 470 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 NOP2P46087 812 aaKnown RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 AP1S1P61966 158 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 BCL2L1Q07817 233 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 DPYSQ14117 519 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 IRF4Q15306 451 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 DPYSL2Q16555 572 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 HADHQ16836 314 aaKnown RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 GUSBP11Q6P575 273 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TMEM139Q8IV31 216 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 RHOT2Q8IXI1 618 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TEKT4Q8WW24 435 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TMEM159Q96B96 161 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 LIN37Q96GY3 246 aaPredicted RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 WDR92Q96MX6 357 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 TMEM74Q96NL1 305 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 ZNF599Q96NL3 588 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 SLC46A1Q96NT5 459 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 BAG1Q99933 345 aaPredicted RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 WRAP53Q9BUR4 548 aaKnown RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 APOOQ9BUR5 198 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 LRRC61Q9BV99 259 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 SLC39A8Q9C0K1 460 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 STRADBQ9C0K7 418 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 SP110Q9HB58 689 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 PCDH18Q9HCL0 1135 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 PCDH12Q9NPG4 1184 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 HAUS2Q9NVX0 235 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 LHX3Q9UBR4 397 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 KLQ9UEF7 1012 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 KLF15Q9UIH9 416 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 GGT7Q9UJ14 662 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 REXO2Q9Y3B8 237 aaKnown RBP10.42□□□□□ -0.74
TTC28-207ENST00000490475 HYOU1Q9Y4L1 999 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 DGKBQ9Y6T7 804 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 DUSP10Q9Y6W6 482 aa10.42□□□□□ -0.74
TTC28-207ENST00000490475 ANKRD36A6QL64 1941 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 GCATO75600 419 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 MTA2O94776 668 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ITGA2BP08514 1039 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ELFN1P0C7U0 828 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 PNLIPP16233 465 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 TGM2P21980 687 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ARL4AP40617 200 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
TTC28-207ENST00000490475 ARSEP51690 589 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 CDH6P55285 790 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 KIAA1024LP59773 190 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 SRP54P61011 504 aaKnown RBP10.41□□□□□ -0.74
TTC28-207ENST00000490475 CXADRP78310 365 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 IL10RBQ08334 325 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 KRT81Q14533 505 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 TCEAL1Q15170 157 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 CYTH1Q15438 398 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 WSCD2Q2TBF2 565 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 C3orf38Q5JPI3 329 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 RALGPS1Q5JS13 557 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ENPP7Q6UWV6 458 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 SRLQ86TD4 932 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 HID1Q8IV36 788 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 TP53INP2Q8IXH6 220 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 SLC35F3Q8IY50 421 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 RBFAQ8N0V3 343 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 KCTD6Q8NC69 237 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 ACRBPQ8NEB7 543 aa10.41□□□□□ -0.74
TTC28-207ENST00000490475 NSMCE1Q8WV22 266 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms