RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 RAPGEF5Q92565 580 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 MAML1Q92585 1016 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 HDAC11Q96DB2 347 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 NUS1Q96E22 293 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 WDR26Q9H7D7 661 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
SEC13-218ENST00000490283 IGF2RP11717 2491 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 PSMD11O00231 422 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 HEXIM1O94992 359 aaKnown RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 TNFP01375 233 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TNNT1P13805 278 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TSHRP16473 764 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 CYLC1P35663 651 aaPredicted RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 MAGEA1P43355 309 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 CLDN6P56747 220 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 SRP54P61011 504 aaKnown RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 INSM1Q01101 510 aaPredicted RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 GBE1Q04446 702 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TARDBPQ13148 414 aaKnown RBP eCLIP17.49■□□□□ 0.39
SEC13-218ENST00000490283 SPA17Q15506 151 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 CNGA3Q16281 694 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 ALG11Q2TAA5 492 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 GKN2Q86XP6 184 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 CCDC13Q8IYE1 715 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 CACTIN-AS1Q8N1I8 211 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 SDR16C5Q8N3Y7 309 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.49■□□□□ 0.39
SEC13-218ENST00000490283 PQLC3Q8N755 202 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TPCN2Q8NHX9 752 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TSACCQ96A04 125 aaPredicted RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 SCRN2Q96FV2 425 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 NSMCE3Q96MG7 304 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 TCEAL2Q9H3H9 227 aaPredicted RBP17.49■□□□□ 0.39
SEC13-218ENST00000490283 CAAP1Q9H8G2 361 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 DTLQ9NZJ0 730 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 DKK4Q9UBT3 224 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 DNPEPQ9ULA0 475 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 HEY1Q9Y5J3 304 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 USP24Q9UPU5 2620 aa17.49■□□□□ 0.39
SEC13-218ENST00000490283 CPED1A4D0V7 1026 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 IPO7O95373 1038 aaKnown RBP17.48■□□□□ 0.39
SEC13-218ENST00000490283 MT-CO3P00414 261 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 CYP4F3Q08477 520 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 CAMK2BQ13554 666 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 TCEAL1Q15170 157 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 CDKN3Q16667 212 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 C6orf132Q5T0Z8 1188 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 PNCKQ6P2M8 343 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 CCDC170Q8IYT3 715 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 TC2NQ8N9U0 490 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 PLA2G15Q8NCC3 412 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 OR56A4Q8NGH8 313 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 MAPK15Q8TD08 544 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 NAT6Q93015 286 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 COQ10AQ96MF6 247 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 DEPDC7Q96QD5 511 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 AK5Q9Y6K8 562 aa17.48■□□□□ 0.39
SEC13-218ENST00000490283 GOLGA6CA6NDK9 693 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 GOLGA6BA6NDN3 693 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 PPP1R12AO14974 1030 aaPredicted RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 YY2O15391 372 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 OPA1O60313 960 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 GCATO75600 419 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 HOXC4P09017 264 aaPredicted RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 GOLGA6DP0CG33 693 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 MYF5P13349 255 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 CTPS1P17812 591 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 DSC2Q02487 901 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 PDK1Q15118 436 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 ALG1LQ6GMV1 187 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 LVRNQ6Q4G3 990 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 EFL1Q7Z2Z2 1120 aaKnown RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 FUBP1Q96AE4 644 aaKnown RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 RNF25Q96BH1 459 aaPredicted RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 DTD2Q96FN9 168 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 MCCC1Q96RQ3 725 aaPredicted RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 BOCQ9BWV1 1114 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 PHPT1Q9NRX4 125 aaPredicted RBP17.47■□□□□ 0.39
SEC13-218ENST00000490283 GOLGA6AQ9NYA3 693 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 MOSPD1Q9UJG1 213 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 DGKBQ9Y6T7 804 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 PTPRBP23467 1997 aa17.47■□□□□ 0.39
SEC13-218ENST00000490283 LY6G6EA0A0G2JKS1 128 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 NPIPB15A6NHN6 443 aaPredicted RBP17.46■□□□□ 0.39
SEC13-218ENST00000490283 TNFRSF10CO14798 259 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 HLA-DQB2P05538 268 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 ZNF30P17039 623 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 COMTP21964 271 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 TRIM23P36406 574 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 PPIDQ08752 370 aaKnown RBP17.46■□□□□ 0.39
SEC13-218ENST00000490283 AP1B1Q10567 949 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 SLC9A4Q6AI14 798 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 RAET1GQ6H3X3 334 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 GUSBP11Q6P575 273 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 BZW1Q7L1Q6 419 aaKnown RBP17.46■□□□□ 0.39
SEC13-218ENST00000490283 PLD5Q8N7P1 536 aa17.46■□□□□ 0.39
SEC13-218ENST00000490283 ARL10Q8N8L6 244 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms