RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 MYF5P13349 255 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 TNNT1P13805 278 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 CCNB1P14635 433 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 JUPP14923 745 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 DUSP3P51452 185 aaPredicted RBP19.8■□□□□ 0.76
SMC4-222ENST00000490207 KIAA1024LP59773 190 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 DSC2Q02487 901 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 C1orf61Q13536 156 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 CAMK2BQ13554 666 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 ALG11Q2TAA5 492 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 DENND2CQ68D51 928 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 SLC9A4Q6AI14 798 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 ESRP1Q6NXG1 681 aaKnown RBP19.8■□□□□ 0.76
SMC4-222ENST00000490207 USP45Q70EL2 814 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 RFX6Q8HWS3 928 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 HID1Q8IV36 788 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMC4-222ENST00000490207 CCNYQ8ND76 341 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 MDM1Q8TC05 714 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 COQ10AQ96MF6 247 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
SMC4-222ENST00000490207 DDX56Q9NY93 547 aaKnown RBP19.8■□□□□ 0.76
SMC4-222ENST00000490207 KLQ9UEF7 1012 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 HEY1Q9Y5J3 304 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 U3KQA8 63 aa19.8■□□□□ 0.76
SMC4-222ENST00000490207 GOLGA4Q13439 2230 aaKnown RBP19.8■□□□□ 0.76
SMC4-222ENST00000490207 CACNB4O00305 520 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 GCATO75600 419 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 RASGRP1O95267 797 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 CAPNS1P04632 268 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 ANXA6P08133 673 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 CTPS1P17812 591 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 COMTP21964 271 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 LHCGRP22888 699 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 CES1P23141 567 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 CYLC1P35663 651 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 NOP2P46087 812 aaKnown RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 HK3P52790 923 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 HADHBP55084 474 aaKnown RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 E2F1Q01094 437 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 PPIDQ08752 370 aaKnown RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 ARHGEF7Q14155 803 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 PROSER1Q86XN7 944 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 CCDC170Q8IYT3 715 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 FSTL5Q8N475 847 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 TSACCQ96A04 125 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 FUBP1Q96AE4 644 aaKnown RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 RNF25Q96BH1 459 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 PDXPQ96GD0 296 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 MCCC1Q96RQ3 725 aaPredicted RBP19.79■□□□□ 0.76
SMC4-222ENST00000490207 WDR26Q9H7D7 661 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 NCKIPSDQ9NZQ3 722 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 SALL4Q9UJQ4 1053 aa19.79■□□□□ 0.76
SMC4-222ENST00000490207 LMO7DNF2Z398 122 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PSMD11O00231 422 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PSTPIP1O43586 416 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 FZD6O60353 706 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PDHA1P08559 390 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 ALPIP09923 528 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 KRT10P13645 584 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 CTSEP14091 401 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 TSHRP16473 764 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 ZFXP17010 805 aaPredicted RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 CA4P22748 312 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 SRP54P61011 504 aaKnown RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 INSM1Q01101 510 aaPredicted RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 SPA17Q15506 151 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 C6orf132Q5T0Z8 1188 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 NYAP1Q6ZVC0 841 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 RD3Q7Z3Z2 195 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 TSPAN33Q86UF1 283 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 NDUFAF2Q8N183 169 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PDCD7Q8N8D1 485 aaKnown RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 TPCN2Q8NHX9 752 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 IFI44Q8TCB0 444 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PIH1D2Q8WWB5 315 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 DTD2Q96FN9 168 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 SCRN2Q96FV2 425 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 LGMNQ99538 433 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 TDRD1Q9BXT4 1180 aaKnown RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 CLPBQ9H078 707 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 LUC7LQ9NQ29 371 aaKnown RBP19.78■□□□□ 0.76
SMC4-222ENST00000490207 KCTD5Q9NXV2 234 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PPIL1Q9Y3C6 166 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 PCDHA13Q9Y5I0 950 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 FREM2Q5SZK8 3169 aa19.78■□□□□ 0.76
SMC4-222ENST00000490207 TRABD2BA6NFA1 517 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 SRRM3A6NNA2 597 aaPredicted RBP19.77■□□□□ 0.76
SMC4-222ENST00000490207 GP1BAP07359 652 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 CELA2BP08218 269 aaPredicted RBP19.77■□□□□ 0.76
SMC4-222ENST00000490207 KELP23276 732 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 EPHB1P54762 984 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 DYNLT1P63172 113 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 IFI35P80217 286 aaPredicted RBP19.77■□□□□ 0.76
SMC4-222ENST00000490207 NIPAL4Q0D2K0 466 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 TARDBPQ13148 414 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMC4-222ENST00000490207 ELOCQ15369 112 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 NR0B2Q15466 257 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 TCEA2Q15560 299 aa19.77■□□□□ 0.76
SMC4-222ENST00000490207 CDKN3Q16667 212 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms