RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	SLC6A14	Q9UN76	642 aa		18.29	■□□□□ 0.52
SRM-206	ENST00000490101	CACNA1E	Q15878	2313 aa		18.29	■□□□□ 0.52
SRM-206	ENST00000490101	ZZEF1	O43149	2961 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	LOC285095	A0A1B0GVY8	99 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	TTC24	A2A3L6	582 aa	Predicted RBP	18.28	■□□□□ 0.52
SRM-206	ENST00000490101	IGSF6	O95976	241 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	TOP3B	O95985	862 aa	Known RBP	18.28	■□□□□ 0.52
SRM-206	ENST00000490101	NNMT	P40261	264 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	MAGEA4	P43358	317 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	TNNT3	P45378	269 aa	Predicted RBP	18.28	■□□□□ 0.52
SRM-206	ENST00000490101	PMS2	P54278	862 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	SNRPD1	P62314	119 aa	Known RBP	18.28	■□□□□ 0.52
SRM-206	ENST00000490101	PDIA2	Q13087	525 aa	Known RBP	18.28	■□□□□ 0.52
SRM-206	ENST00000490101	PTPRN	Q16849	979 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	BBS9	Q3SYG4	887 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	DENND5A	Q6IQ26	1287 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	RGL4	Q8IZJ4	473 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	OR2AP1	Q8NGE2	309 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	OR2I1P	Q8NGU4	316 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	SORCS1	Q8WY21	1168 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	MYO19	Q96H55	970 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	FEM1C	Q96JP0	617 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	EXOC2	Q96KP1	924 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	NSMCE3	Q96MG7	304 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	FICD	Q9BVA6	458 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	SLC32A1	Q9H598	525 aa		18.28	■□□□□ 0.52
SRM-206	ENST00000490101	USP12	O75317	370 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	AVIL	O75366	819 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	GJB3	O75712	270 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	AGT	P01019	485 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	IL12RB1	P42701	662 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	NPY2R	P49146	381 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	CDH17	Q12864	832 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	OLIG2	Q13516	323 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.27	■□□□□ 0.52
SRM-206	ENST00000490101	RABEPK	Q7Z6M1	372 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	CACUL1	Q86Y37	369 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	HDDC3	Q8N4P3	179 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	OR52K1	Q8NGK4	314 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	FRS2	Q8WU20	508 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	CYB5D2	Q8WUJ1	264 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	UCMA	Q8WVF2	138 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	SIGLEC10	Q96LC7	697 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	FSD1L	Q9BXM9	530 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	TM6SF2	Q9BZW4	377 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	PLA2G4C	Q9UP65	541 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	TEX264	Q9Y6I9	313 aa		18.27	■□□□□ 0.52
SRM-206	ENST00000490101	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.26	■□□□□ 0.51
SRM-206	ENST00000490101	SDR42E2	A6NKP2	422 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	C1QTNF9B	B2RNN3	333 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	C1QTNF9	P0C862	333 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	ST8SIA6	P61647	398 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	CDK18	Q07002	472 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	MYLK3	Q32MK0	819 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	ACCSL	Q4AC99	568 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	CCDC38	Q502W7	563 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	CARD16	Q5EG05	197 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	AGGF1	Q8N302	714 aa	eCLIP	18.26	■□□□□ 0.51
SRM-206	ENST00000490101	MINDY1	Q8N5J2	469 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	TRIB3	Q96RU7	358 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	APOL2	Q9BQE5	337 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	TNKS2	Q9H2K2	1166 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	PABPC3	Q9H361	631 aa	Known RBP	18.26	■□□□□ 0.51
SRM-206	ENST00000490101	CDC42EP4	Q9H3Q1	356 aa	Known RBP	18.26	■□□□□ 0.51
SRM-206	ENST00000490101	CAPN10	Q9HC96	672 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	NINJ2	Q9NZG7	142 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	BFAR	Q9NZS9	450 aa		18.26	■□□□□ 0.51
SRM-206	ENST00000490101	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.26	■□□□□ 0.51
SRM-206	ENST00000490101	SPAAR	A0A1B0GVQ0	90 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	SYNCRIP	O60506	623 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	BANF1	O75531	89 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	POP4	O95707	220 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	TTC4	O95801	387 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	NDST3	O95803	873 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	TSHR	P16473	764 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	CA4	P22748	312 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	MAOB	P27338	520 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	CD6	P30203	668 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	HSD17B3	P37058	310 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	ZNF234	Q14588	700 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	CASP8	Q14790	479 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	FASTKD3	Q14CZ7	662 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	E2F5	Q15329	346 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	UAP1	Q16222	522 aa	Predicted RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	PCSK7	Q16549	785 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	ARMC3	Q5W041	872 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	UNQ6494/PRO21346	Q6UXR6	183 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	HDX	Q7Z353	690 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	ZBED8	Q8IZ13	594 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	DNAAF3	Q8N9W5	541 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	PYROXD1	Q8WU10	500 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	IFT43	Q96FT9	208 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	TTC25	Q96NG3	672 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	WDR83	Q9BRX9	315 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	TDRD1	Q9BXT4	1180 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	FUT8	Q9BYC5	575 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	CPEB1	Q9BZB8	566 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	MKRN2	Q9H000	416 aa	Known RBP	18.25	■□□□□ 0.51
SRM-206	ENST00000490101	EPB41L4B	Q9H329	900 aa		18.25	■□□□□ 0.51
SRM-206	ENST00000490101	ZNF446	Q9NWS9	450 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms