RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	GRID2IP	A4D2P6	1211 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	PSMD11	O00231	422 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	ENC1	O14682	589 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	MTSS1	O43312	755 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	PDHA1	P08559	390 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	JUND	P17535	347 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CTPS1	P17812	591 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CETN2	P41208	172 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CD86	P42081	329 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	RWDD2B	P57060	319 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	RPL26	P61254	145 aa	Known RBP	11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	EIF2B5	Q13144	721 aa	Known RBP	11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	ZNF211	Q13398	564 aa	Predicted RBP	11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CNGA3	Q16281	694 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	TPRG1L	Q5T0D9	272 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CCDC181	Q5TID7	509 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	DENND2C	Q68D51	928 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	PEX26	Q7Z412	305 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	SLCO6A1	Q86UG4	719 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CNTD1	Q8N815	330 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	PNPLA1	Q8N8W4	532 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	LRRC57	Q8N9N7	239 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CCDC112	Q8NEF3	446 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	ADAMTS14	Q8WXS8	1223 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	NUS1	Q96E22	293 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	COQ10A	Q96MF6	247 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	AGAP3	Q96P47	875 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	APOO	Q9BUR5	198 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	DUSP23	Q9BVJ7	150 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	SCNM1	Q9BWG6	230 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	HEMGN	Q9BXL5	484 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	ADGRE3	Q9BY15	652 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	SLC13A1	Q9BZW2	595 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	PCDH9	Q9HC56	1237 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	UCKL1	Q9NWZ5	548 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	TOR4A	Q9NXH8	423 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	DNPEP	Q9ULA0	475 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	RPL26L1	Q9UNX3	145 aa	Known RBP	11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	WASF3	Q9UPY6	502 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	CHKB	Q9Y259	395 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772	OR1A2	Q9Y585	309 aa		11.11	□□□□□ -0.63
GGA1-222	ENST00000489772		A0A0J9YYE9	177 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CACNB4	O00305	520 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	TRIM38	O00635	465 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	SCAMP1	O15126	338 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	FFAR2	O15552	330 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	HYAL3	O43820	417 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	TOP3B	O95985	862 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	TRBC1	P01850	177 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ALPI	P09923	528 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CDK4	P11802	303 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PECAM1	P16284	738 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CKMT2	P17540	419 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	LHCGR	P22888	699 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CTNNA2	P26232	953 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	HNF1B	P35680	557 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ETV3	P41162	512 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	BLK	P51451	505 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	SKOR1	P84550	965 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PPARD	Q03181	441 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ADCY2	Q08462	1091 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	IHH	Q14623	411 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	NFATC4	Q14934	902 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PRKD1	Q15139	912 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	TEX44	Q53QW1	395 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CCDC157	Q569K6	752 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	FAXC	Q5TGI0	409 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PNCK	Q6P2M8	343 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ENPP7	Q6UWV6	458 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	BBS12	Q6ZW61	710 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	B4GALNT4	Q76KP1	1039 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	HSD11B1L	Q7Z5J1	315 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	NT5DC3	Q86UY8	548 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ZC3H18	Q86VM9	953 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CHCHD4	Q8N4Q1	142 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	RNF10	Q8N5U6	811 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	UBL4B	Q8N7F7	174 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PLA2G15	Q8NCC3	412 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	LPCAT1	Q8NF37	534 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	OR4C6	Q8NH72	309 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	HAUS1	Q96CS2	278 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	IMP4	Q96G21	291 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CEP41	Q9BYV8	373 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	TSGA10	Q9BZW7	698 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	SLC25A51	Q9H1U9	297 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	WDR26	Q9H7D7	661 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	NLGN3	Q9NZ94	848 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	SPAST	Q9UBP0	616 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	APOBEC3B	Q9UH17	382 aa	Known RBP	11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	KLF15	Q9UIH9	416 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	AMFR	Q9UKV5	643 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	EFR3B	Q9Y2G0	817 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	NEUROG3	Q9Y4Z2	214 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	PCDHGA1	Q9Y5H4	931 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CSNK1G3	Q9Y6M4	447 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CHD8	Q9HCK8	2581 aa		11.1	□□□□□ -0.63
GGA1-222	ENST00000489772	CAPN8	A6NHC0	703 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms