RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PRPSAP1Q14558 356 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 IHHQ14623 411 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 LRRC14Q15048 493 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 OASLQ15646 514 aaKnown RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CNGA3Q16281 694 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CCNG2Q16589 344 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 P3H1Q32P28 736 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 STPG1Q5TH74 334 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CCDC70Q6NSX1 233 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CBARPQ8N350 705 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 SLC35F6Q8N357 371 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 MINDY1Q8N5J2 469 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 TP53I13Q8NBR0 393 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 LPCAT1Q8NF37 534 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 KLHDC7BQ96G42 594 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 COQ10AQ96MF6 247 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 RTKNQ9BST9 563 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 TRMT1Q9NXH9 659 aaKnown RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GOLGA6AQ9NYA3 693 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 PYCARDQ9ULZ3 195 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CHKBQ9Y259 395 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 R3HDM2Q9Y2K5 976 aaKnown RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 RGSL1A5PLK6 1076 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 CEP104O60308 925 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 PCDHGA12O60330 932 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 RECQL5O94762 991 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 FGGP02679 453 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 PYGLP06737 847 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 TCP1P17987 556 aaKnown RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 HLA-DPA1P20036 260 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 LHCGRP22888 699 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 HNF1BP35680 557 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 IGFALSP35858 605 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 RXRGP48443 463 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 ARRB1P49407 418 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 PFN3P60673 137 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 MTM1Q13496 603 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 PTK2BQ14289 1009 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 QPCTQ16769 361 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 C4orf22Q6V702 233 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 B4GALNT4Q76KP1 1039 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF765Q7L2R6 523 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 NLRP8Q86W28 1048 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 KLK6Q92876 244 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 DTD2Q96FN9 168 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 ELF4Q99607 663 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 GTPBP2Q9BX10 602 aaKnown RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 FSD1LQ9BXM9 530 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 CDH19Q9H159 772 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 TRABDQ9H4I3 376 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 MAGEE1Q9HCI5 957 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 RXFP3Q9NSD7 469 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 DLL3Q9NYJ7 618 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 HACD3Q9P035 362 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 FEZ2Q9UHY8 353 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 SNX11Q9Y5W9 270 aa11.1□□□□□ -0.63
CPSF7-212ENST00000489728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 TP53BP1Q12888 1972 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-212ENST00000489728 LRRK1Q38SD2 2015 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 USP27XA6NNY8 438 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ERI2A8K979 691 aaKnown RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 PGRMC1O00264 195 aaKnown RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ENC1O14682 589 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 WNT9AO14904 365 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 RAD51BO15315 384 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 PSMD3O43242 534 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 GDF9O60383 454 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 MT-CYBP00156 380 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 PRKCGP05129 697 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 FGF1P05230 155 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 HOXC4P09017 264 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 THEGLP0DJG4 465 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 TSHRP16473 764 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ITIH2P19823 946 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 CCT8P50990 548 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 STC1P52823 247 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 WNT3AP56704 352 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 DPTQ07507 201 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ACOX1Q15067 660 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 IRF4Q15306 451 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 LONRF2Q1L5Z9 754 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 PARP6Q2NL67 630 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 WSCD2Q2TBF2 565 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 HLA-BQ31612 363 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 LRRC66Q68CR7 880 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 CRTC1Q6UUV9 634 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms