RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 SGK2Q9HBY8 427 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 NLRC4Q9NPP4 1024 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 HAUS2Q9NVX0 235 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.9□□□□□ -1.46
CNOT9-207ENST00000489687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.9□□□□□ -1.46
CNOT9-207ENST00000489687 DACH1Q9UI36 760 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 SLC25A13Q9UJS0 675 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 NOCTQ9UK39 431 aaKnown RBP5.9□□□□□ -1.46
CNOT9-207ENST00000489687 NCKAP1Q9Y2A7 1128 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 MSRB2Q9Y3D2 182 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 OR51B4Q9Y5P0 310 aa5.9□□□□□ -1.46
CNOT9-207ENST00000489687 SPTA1P02549 2419 aa5.9□□□□□ -1.47
CNOT9-207ENST00000489687 ZNF462Q96JM2 2506 aa5.9□□□□□ -1.47
CNOT9-207ENST00000489687 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
CNOT9-207ENST00000489687 AHCTF1Q8WYP5 2266 aa5.9□□□□□ -1.47
CNOT9-207ENST00000489687 CHD5Q8TDI0 1954 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FLNBO75369 2602 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 RP1P56715 2156 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3DA0A087WVF3 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3IA0A087WXS9 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3EA0A087X179 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3KA0A087X1G2 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 A0A1W2PPC4 97 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 A0A1W2PR77 199 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3FA6NER0 549 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3LB9A6J9 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 E9PAM4 449 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FAM72CH0Y354 149 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FFAR2O15552 330 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FLRT2O43155 660 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SRGAP2O75044 1071 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ATP5HO75947 161 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GLI1P08151 1106 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SRPRAP08240 638 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3HP0C7X1 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SLC2A3P11169 496 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 MYF5P13349 255 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GOT1P17174 413 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CHRNB2P17787 502 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 C5AR1P21730 350 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GKP32189 559 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GPC1P35052 558 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 NOS2P35228 1153 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ACVRL1P37023 503 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GRK6P43250 576 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CXCR3P49682 368 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 DNA2P51530 1060 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 VAV2P52735 878 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 GDF10P55107 478 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CLDN2P57739 230 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TAS2R38P59533 333 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 POLR2FP61218 127 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 RPL26P61254 145 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 RACK1P63244 317 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TUBA4AP68366 448 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 MXRA7P84157 204 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FMO1Q01740 532 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 OCRLQ01968 901 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SLC14A1Q13336 389 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ZNF177Q13360 481 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 KPNB1Q14974 876 aaKnown RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CNGA3Q16281 694 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 INAQ16352 499 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CCDC153Q494R4 210 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CCDC14Q49A88 953 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TCP11X2Q5H9J9 407 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 PIP5KL1Q5T9C9 394 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 RNF187Q5TA31 235 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FAM72AQ5TYM5 149 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SEL1L3Q68CR1 1132 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3GQ6DHY5 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3CQ6IPX1 549 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FAM72DQ6L9T8 149 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 NEPROQ6NW34 567 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 C22orf39Q6P5X5 142 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 NCCRP1Q6ZVX7 275 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 USP30Q70CQ3 517 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 BEND5Q7L4P6 421 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CROCCP2Q86T23 111 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 FAM72BQ86X60 149 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 DNAAF5Q86Y56 855 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TBC1D3Q8IZP1 549 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SH2D3CQ8N5H7 860 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 EID2Q8N6I1 236 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ANKS4BQ8N8V4 417 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ZNF557Q8N988 423 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 KDF1Q8NAX2 398 aaPredicted RBP5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 JOSD2Q8TAC2 188 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 AGAP11Q8TF27 550 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ADAMTS14Q8WXS8 1223 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 ARRDC3Q96B67 414 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CRELD1Q96HD1 420 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 MRGPRX2Q96LB1 330 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 CATSPER2Q96P56 530 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 TMEM237Q96Q45 408 aa5.89□□□□□ -1.47
CNOT9-207ENST00000489687 SPON2Q9BUD6 331 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms