RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 FRMD8P1Q9BZ68 369 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 NAA50Q9GZZ1 169 aaKnown RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 POLE4Q9NR33 117 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 RCOR3Q9P2K3 495 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 STK39Q9UEW8 545 aa9.87□□□□□ -0.83
NOD1-208ENST00000489614 TNRC18O15417 2968 aaPredicted RBP9.87□□□□□ -0.83
NOD1-208ENST00000489614 PRPF4O43172 522 aaKnown RBP eCLIP9.86□□□□□ -0.83
NOD1-208ENST00000489614 ACRP10323 421 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MX2P20592 715 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KLRC2P26717 231 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 BMPR1AP36894 532 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CXCR3P49682 368 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 P2RX3P56373 397 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 COPZ1P61923 177 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MTM1Q13496 603 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CCNG2Q16589 344 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CA9Q16790 459 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 AARS2Q5JTZ9 985 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 MANEALQ5VSG8 457 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 BTBD8Q5XKL5 378 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KRT80Q6KB66 452 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ZNF683Q8IZ20 524 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.86□□□□□ -0.83
NOD1-208ENST00000489614 TOR1AIP2Q8NFQ8 470 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ZNF486Q96H40 463 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 SNRNP25Q9BV90 132 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 SLC2A11Q9BYW1 496 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SMOC2Q9H3U7 446 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CXXC1Q9P0U4 656 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 POMPQ9Y244 141 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 PCM1Q15154 2024 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SNTNA6NMZ2 147 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 LIASO43766 372 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ZMPSTE24O75844 475 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KCNH1O95259 989 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 S100A5P33763 92 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 GPR15P49685 360 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ATXN1P54253 815 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 PRAMEP78395 509 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 NRG1Q02297 640 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 KCNC4Q03721 635 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 PDK2Q15119 407 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 USP41Q3LFD5 358 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 OGFRL1Q5TC84 451 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 DENND5BQ6ZUT9 1274 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ARID3BQ8IVW6 561 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 PQLC1Q8N2U9 271 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CCDC185Q8N715 623 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 LILRB1Q8NHL6 650 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 RTP4Q96DX8 246 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SLC39A13Q96H72 371 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ZNF670Q9BS34 389 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MED10Q9BTT4 135 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 COQ3Q9NZJ6 369 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 DRG1Q9Y295 367 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 PCDHB5Q9Y5E4 795 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CPQQ9Y646 472 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ILVBLA1L0T0 632 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CAPN14A8MX76 684 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 NT5C1B-RDH14C9J2C7 533 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 H3BNX3 289 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ALOX15BO15296 676 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 ACSL4O60488 711 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KCNJ13O60928 360 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 RSL1D1O76021 490 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 LTFP02788 710 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 USP17L7P0C7H9 530 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 RACK1P63244 317 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 RAB33AQ14088 237 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 DPYSQ14117 519 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MAPK11Q15759 364 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 CTXN3Q4LDR2 81 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 BOLA3Q53S33 107 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 RARS2Q5T160 578 aaKnown RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 PXDC1Q5TGL8 231 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 PSRC1Q6PGN9 363 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 RHBDF2Q6PJF5 856 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 TMEM26Q6ZUK4 368 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 OTOP3Q7RTS5 596 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SPATA2LQ8IUW3 424 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 FBXO22Q8NEZ5 403 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SCAMP5Q8TAC9 235 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 OMA1Q96E52 524 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 MAP6Q96JE9 813 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KCTD15Q96SI1 283 aaPredicted RBP9.86□□□□□ -0.83
NOD1-208ENST00000489614 NMUR1Q9HB89 426 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 SAYSD1Q9NPB0 183 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 PIGVQ9NUD9 493 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 IRAK3Q9Y616 596 aa9.86□□□□□ -0.83
NOD1-208ENST00000489614 KCNU1A8MYU2 1149 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 MEN1O00255 615 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 TYROBPO43914 113 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 GRAP2O75791 330 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 BMP10O95393 424 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 GCAP28676 217 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 PRDX6P30041 224 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SDC4P31431 198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms