RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 EFEMP1Q12805 493 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 POLD3Q15054 466 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PSMD5Q16401 504 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.51□□□□□ -1.052e-7■□□□□ 9.3
VTI1A-207ENST00000489357 MGAT5BQ3V5L5 792 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PREPLQ4J6C6 727 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 RALGPS1Q5JS13 557 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 TSTD2Q5T7W7 516 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 LIPMQ5VYY2 423 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 FBXL22Q6P050 247 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 KLC3Q6P597 504 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 LYSMD3Q7Z3D4 306 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 SETD3Q86TU7 594 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CEP57Q86XR8 500 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 ENDOVQ8N8Q3 282 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 ATAD1Q8NBU5 361 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 SPATA22Q8NHS9 363 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 STYXQ8WUJ0 223 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 MSLNLQ96KJ4 702 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 RPRD1AQ96P16 312 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 KLHL5Q96PQ7 755 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 ASB2Q96Q27 587 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 AGAP2Q99490 1192 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CLSTN3Q9BQT9 956 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 MECRQ9BV79 373 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 DCLRE1BQ9H816 532 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 EBF2Q9HAK2 575 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 POPDC3Q9HBV1 291 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 IARS2Q9NSE4 1012 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 OXSMQ9NWU1 459 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 NOP53Q9NZM5 478 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CLEC1BQ9P126 229 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 AFF4Q9UHB7 1163 aaKnown RBP8.51□□□□□ -1.05
VTI1A-207ENST00000489357 BAIAP2L1Q9UHR4 511 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 TAGLN3Q9UI15 199 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 TRIM33Q9UPN9 1127 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 SSX2IPQ9Y2D8 614 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 RAP2CQ9Y3L5 183 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 SNX10Q9Y5X0 201 aa8.51□□□□□ -1.05
VTI1A-207ENST00000489357 CHD5Q8TDI0 1954 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SLC12A8A0AV02 714 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SLC38A8A6NNN8 435 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 TARM1B6A8C7 271 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 F5H423 210 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 F8W8V4 182 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 TEX28O15482 410 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ACSL4O60488 711 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NPHS1O60500 1241 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 CLDN11O75508 207 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 VAPBO95292 243 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MT-CYBP00156 380 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 AHSGP02765 367 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SLC35E2BP0CK96 405 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 OGNP20774 298 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 TACR2P21452 398 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ARNTP27540 789 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 OR1E1P30953 314 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 GCKP35557 465 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NRIP1P48552 1158 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 KCNQ1P51787 676 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 IRX1P78414 480 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 DLX2Q07687 328 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 USP10Q14694 798 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 GRM3Q14832 879 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 POU6F1Q14863 301 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ZRSR2Q15696 482 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 FAM83EQ2M2I3 478 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 AAK1Q2M2I8 961 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 PLPP4Q5VZY2 271 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 NEPROQ6NW34 567 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ARHGAP36Q6ZRI8 547 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 RAPH1Q70E73 1250 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 PRICKLE2Q7Z3G6 844 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 PIWIL4Q7Z3Z4 852 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 C14orf80Q86SX3 495 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 SLC22A9Q8IVM8 553 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 C10orf107Q8IVU9 208 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MFN1Q8IWA4 741 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 AFAP1L2Q8N4X5 818 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 GPR150Q8NGU9 434 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF461Q8TAF7 563 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 AUTS2Q8WXX7 1259 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 UTP4Q969X6 686 aaKnown RBP8.5□□□□□ -1.05
VTI1A-207ENST00000489357 MCUR1Q96AQ8 359 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 CMTM5Q96DZ9 223 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 HMCESQ96FZ2 354 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 FAR2Q96K12 515 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 B3GALT6Q96L58 329 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 RILPQ96NA2 401 aa8.5□□□□□ -1.05
VTI1A-207ENST00000489357 PSKH2Q96QS6 385 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms