RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-220ENST00000489318 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 SLC17A6Q9P2U8 582 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 IL36AQ9UHA7 158 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 TBK1Q9UHD2 729 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 ARL5AQ9Y689 179 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 IKBKGQ9Y6K9 419 aa11.52□□□□□ -0.57
C9orf3-220ENST00000489318 PLXNB3Q9ULL4 1909 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 TBC1D3BA6NDS4 549 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 C2orf81A6NN90 581 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 LEFTY1O75610 366 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 PRNPP04156 253 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SNRPAP09012 282 aaKnown RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 ALPIP09923 528 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 PIRTP0C851 137 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 GLULP15104 373 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 OGNP20774 298 aaKnown RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 LPOP22079 712 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 CCNFP41002 786 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 MAGEA12P43365 314 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 KIR2DL1P43626 348 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 CSRP3P50461 194 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 GALK1P51570 392 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SLC18A1P54219 525 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 PPP2R2AP63151 447 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 ILF2Q12905 390 aaKnown RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 UGP2Q16851 508 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 C9orf64Q5T6V5 341 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 GRTP1Q5TC63 336 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 LGSNQ5TDP6 509 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 EGFLAMQ63HQ2 1017 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 TXNDC11Q6PKC3 985 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SERPINA13PQ6UXR4 307 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SH2D5Q6ZV89 423 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 USP45Q70EL2 814 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 NDUFAF2Q8N183 169 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 ARFGAP2Q8N6H7 521 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 C2CD4AQ8NCU7 369 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 TMIEQ8NEW7 156 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 OR13C4Q8NGS5 318 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 GABPB2Q8TAK5 448 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 FAM76AQ8TAV0 307 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 GRIN3AQ8TCU5 1115 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SMIM14Q96QK8 99 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 AGAP2Q99490 1192 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 PPANQ9NQ55 473 aaKnown RBP11.51□□□□□ -0.57
C9orf3-220ENST00000489318 SLC2A4RGQ9NR83 387 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 MKS1Q9NXB0 559 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 IL17CQ9P0M4 197 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 KCTD3Q9Y597 815 aa11.51□□□□□ -0.57
C9orf3-220ENST00000489318 C5orf42Q9H799 3197 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 CCDC78A2IDD5 438 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 NPIPB15A6NHN6 443 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 LOC730098B7Z3J9 87 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 K7EQS6 105 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 BNIP3LO60238 219 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 ITGA2BP08514 1039 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 C7P10643 843 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 KRT15P19012 456 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 ITGB7P26010 798 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 HNF1BP35680 557 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 HADHAP40939 763 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 SLC1A2P43004 574 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 LEPRP48357 1165 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 POLR2LP62875 67 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 PRAMEP78395 509 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 SKIV2LQ15477 1246 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 TYSND1Q2T9J0 566 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 ZNF805Q5CZA5 627 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 TMEM196Q5HYL7 178 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 ZNF470Q6ECI4 717 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 NEPROQ6NW34 567 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 AFTPHQ6ULP2 937 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 CBARPQ8N350 705 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 ZNF366Q8N895 744 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 OR4K2Q8NGD2 314 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 EID2BQ96D98 161 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 MRRFQ96E11 262 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 CDKN2AIPNLQ96HQ2 116 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 TBATAQ96M53 351 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 KLHL32Q96NJ5 620 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 MTG2Q9H4K7 406 aa11.5□□□□□ -0.57
C9orf3-220ENST00000489318 FBRSL1Q9HCM7 1045 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 BCCIPQ9P287 314 aaKnown RBP eCLIP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 NFKBIL1Q9UBC1 381 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-220ENST00000489318 SUN2Q9UH99 717 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms