RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ACP6Q9NPH0 428 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 CNGB3Q9NQW8 809 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 SEPT11Q9NVA2 429 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZIM2Q9NZV7 527 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ANKRD6Q9Y2G4 727 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA7Q9Y5G6 932 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA6Q9Y5G7 932 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 FAM92AA1XBS5 289 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 LRRC53A6NM62 1247 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TULP2O00295 520 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF500O60304 480 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TLR5O60602 858 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PRAMEF4O60810 478 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 NDUFS2O75306 463 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 KCNK5O95279 499 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 LY86O95711 162 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 MBL2P11226 248 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TNFAIP3P21580 790 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ATP5C1P36542 298 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PBX1P40424 430 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 GPD2P43304 727 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 RPS9P46781 194 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TUBP50607 506 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZBED6P86452 979 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 CDR2Q01850 454 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 MEF2AQ02078 507 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 MALLQ13021 153 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PDCLQ13371 301 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 SIM2Q14190 667 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF268Q14587 947 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ADRM1Q16186 407 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 RAB41Q5JT25 222 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 FAM78AQ5JUQ0 283 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 STXBP5Q5T5C0 1151 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 SNX30Q5VWJ9 437 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PPP1R2P3Q6NXS1 205 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PMF1Q6P1K2 205 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PARM1Q6UWI2 310 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TOGARAM2Q6ZUX3 1019 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 RSRC2Q7L4I2 434 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TMEM150AQ86TG1 271 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 VPS36Q86VN1 386 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ERICH1Q86X53 443 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ARID3BQ8IVW6 561 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 CPA6Q8N4T0 437 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ARL14EPQ8N8R7 260 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 GLB1L3Q8NCI6 653 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 C1orf131Q8NDD1 294 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PPP1R14CQ8TAE6 165 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 RNF139Q8WU17 664 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 DEPDC1BQ8WUY9 529 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 IRGQQ8WZA9 623 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 CLDN23Q96B33 292 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 PPP1R13BQ96KQ4 1090 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 SLC46A2Q9BY10 475 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TRPV4Q9HBA0 871 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 OLA1Q9NTK5 396 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 TDP1Q9NUW8 608 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 OBP2AQ9NY56 170 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 CLIC5Q9NZA1 410 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRAPPC12-221ENST00000489032 DOCK6Q96HP0 2047 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 NOTCH4Q99466 2003 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 C2orf78A6NCI8 922 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 HEPACAM2A8MVW5 462 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 CAPN9O14815 690 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF263O14978 683 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 ARHGAP6O43182 974 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 PHF2O75151 1096 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 LTA4HP09960 611 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZDHHC11BP0C7U3 371 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 GAAP10253 952 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 RARGP13631 454 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 PSMC3P17980 439 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 CD72P21854 359 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 NSFP46459 744 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 DAOAP59103 153 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 YWHAGP61981 247 aaKnown RBP eCLIP8.31□□□□□ -1.089e-7■■■■□ 23.9
TRAPPC12-221ENST00000489032 SLC7A9P82251 487 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 KLHL30Q0D2K2 578 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 MTAPQ13126 283 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 ODF1Q14990 250 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 TDRD12Q587J7 1177 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 EFHC1Q5JVL4 640 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 C10orf120Q5SQS8 335 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 PM20D1Q6GTS8 502 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 TANGO2Q6ICL3 276 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 OR6B2Q6IFH4 312 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 TMEM110Q86TL2 294 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZDHHC17Q8IUH5 632 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 VSTM4Q8IW00 320 aa8.31□□□□□ -1.08
TRAPPC12-221ENST00000489032 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms