RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 AP1S1P61966 158 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 KLHL38Q2WGJ6 581 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 LACTB2Q53H82 288 aaPredicted RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 C4orf22Q6V702 233 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 AADATQ8N5Z0 425 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 ACSS3Q9H6R3 686 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 SSU72Q9NP77 194 aaKnown RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 SCUBE2Q9NQ36 999 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 SERGEFQ9UGK8 458 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 RABGEF1Q9UJ41 708 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 SMG5Q9UPR3 1016 aaKnown RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 PLXND1Q9Y4D7 1925 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 FAM47DPA6NHR8 397 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 PLK4O00444 970 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 KPNA3O00505 521 aaPredicted RBP19.47■□□□□ 0.71
CCM2-216ENST00000488727 AXIN1O15169 862 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 ADH1BP00325 375 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 DNTTP04053 509 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 MMP2P08253 660 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 VIMP08670 466 aaKnown RBP19.47■□□□□ 0.71
CCM2-216ENST00000488727 SP9P0CG40 484 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 DRD3P35462 400 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 BASP1P80723 227 aaKnown RBP19.47■□□□□ 0.71
CCM2-216ENST00000488727 ZBTB16Q05516 673 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 RAD51Q06609 339 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 CAMK1DQ8IU85 385 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 ANKMY2Q8IV38 441 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 ANKS4BQ8N8V4 417 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 ANKRD42Q8N9B4 389 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 MGARPQ8TDB4 240 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 NELL1Q92832 810 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 ARRDC3Q96B67 414 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 LRIG1Q96JA1 1093 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 MAGEB18Q96M61 343 aa19.47■□□□□ 0.71
CCM2-216ENST00000488727 USP36Q9P275 1121 aaKnown RBP19.47■□□□□ 0.71
CCM2-216ENST00000488727 KLHL8Q9P2G9 620 aaPredicted RBP19.47■□□□□ 0.71
CCM2-216ENST00000488727 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 FOXO6A8MYZ6 492 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 C1QTNF3-AMACRE9PGA6 284 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 POC1B-GALNT4F8VUJ3 575 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 NFKB1P19838 968 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 C5AR1P21730 350 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 LIG3P49916 1009 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 TPMTP51580 245 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 LRRC14Q15048 493 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 RALGPS1Q5JS13 557 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 ANKRD20A2Q5SQ80 823 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 HP1BP3Q5SSJ5 553 aaPredicted RBP19.46■□□□□ 0.71
CCM2-216ENST00000488727 RNF187Q5TA31 235 aaPredicted RBP19.46■□□□□ 0.71
CCM2-216ENST00000488727 ANKRD20A1Q5TYW2 823 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 ANKRD20A3Q5VUR7 823 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 GDPD4Q6W3E5 623 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 PID1Q7Z2X4 250 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 FRMD1Q8N878 549 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 CCDC110Q8TBZ0 833 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 RLN3Q8WXF3 142 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 KLHL32Q96NJ5 620 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 TUBGCP5Q96RT8 1024 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 FERMT1Q9BQL6 677 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 KDM4CQ9H3R0 1056 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 GLOD4Q9HC38 313 aa19.46■□□□□ 0.71
CCM2-216ENST00000488727 CCDC163A0A0D9SF12 145 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 TRAFD1O14545 582 aaPredicted RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 BANF1O75531 89 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 SPAG6O75602 509 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ACADMP11310 421 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 MAPK8P45983 427 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ZNF528Q3MIS6 628 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 FAM46CQ5VWP2 391 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 PRPF39Q86UA1 669 aaKnown RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 CCT6BQ92526 530 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 IMP4Q96G21 291 aaKnown RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 SPATA13Q96N96 652 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 OSBPL1AQ9BXW6 950 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 TRABDQ9H4I3 376 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ATP13A3Q9H7F0 1226 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ITM2CQ9NQX7 267 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 HAUS2Q9NVX0 235 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 TRHDEQ9UKU6 1024 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 SCML1Q9UN30 329 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 PCDHGC4Q9Y5F7 938 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 A0A1W2PP55 124 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 TCP11X1B4DZS4 312 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 F5H423 210 aaPredicted RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 SNX3O60493 162 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 STX2P32856 288 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 CD86P42081 329 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 BCL2L1Q07817 233 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ACTN3Q08043 901 aaPredicted RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 TRAF2Q12933 501 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 GRM3Q14832 879 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 BBS9Q3SYG4 887 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 TTC31Q49AM3 519 aaPredicted RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 ZNF805Q5CZA5 627 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ADGRD1Q6QNK2 874 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 WDR5BQ86VZ2 330 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 ZSWIM9Q86XI8 627 aa19.45■□□□□ 0.7
CCM2-216ENST00000488727 FAM160A2Q8N612 972 aaPredicted RBP19.45■□□□□ 0.7
CCM2-216ENST00000488727 SPATA22Q8NHS9 363 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms