RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 KLHL8Q9P2G9 620 aaPredicted RBP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PPIL1Q9Y3C6 166 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PCDHGB2Q9Y5G2 931 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 CABIN1Q9Y6J0 2220 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 CAPN8A6NHC0 703 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 H7C0C1 242 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 LZTS3O60299 673 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RECQL5O94762 991 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RBP3P10745 1247 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 CYP2A6P11509 494 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 NFKB1P19838 968 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 NFKBIAP25963 317 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RBL1P28749 1068 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RABIFP47224 123 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 ATP5OP48047 213 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 EIF3EP60228 445 aaKnown RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RPL26P61254 145 aaKnown RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 LPCAT1Q8NF37 534 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 TRIM58Q8NG06 486 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 SPATA22Q8NHS9 363 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 UBE2Q2Q8WVN8 375 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 COQ10AQ96MF6 247 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 TRIB3Q96RU7 358 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 VAT1Q99536 393 aa16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 RPL26L1Q9UNX3 145 aaKnown RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
ERGIC3-216ENST00000488384 A0A0U1RQS6 177 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 PCDHGA12O60330 932 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 DFNA5O60443 496 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 MT-CYBP00156 380 aaPredicted RBP16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 CSRP1P21291 193 aaKnown RBP16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 EPHA8P29322 1005 aaPredicted RBP16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 HNF1BP35680 557 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 EPHB1P54762 984 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 LRRC14Q15048 493 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 RPS6KA1Q15418 735 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 QPCTQ16769 361 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 SEL1L2Q5TEA6 688 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 DBX2Q6ZNG2 339 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 HSD11B1LQ7Z5J1 315 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 NAXDQ8IW45 347 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 OXR1Q8N573 874 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 DEFB124Q8NES8 71 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 CAAP1Q9H8G2 361 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 ACACBO00763 2458 aa16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 TPRP12270 2363 aaKnown RBP16.04■□□□□ 0.16
ERGIC3-216ENST00000488384 MAP1BP46821 2468 aaKnown RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 F5H423 210 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 PSMD11O00231 422 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 GIPC1O14908 333 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 YKT6O15498 198 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 SH3BP5O60239 455 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 KCNK5O95279 499 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 PCCBP05166 539 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 RXRGP48443 463 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 ARRB1P49407 418 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 FZD2Q14332 565 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 GALNT3Q14435 633 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 GSE1Q14687 1217 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 ACOX1Q15067 660 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 LRRC66Q68CR7 880 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 PSAPL1Q6NUJ1 521 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CRTC1Q6UUV9 634 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 REXO1L1PQ8IX06 675 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 NDUFAF2Q8N183 169 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CBARPQ8N350 705 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 TTC13Q8NBP0 860 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 SAP25Q8TEE9 199 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 OXNAD1Q96HP4 312 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CNTNAP3BQ96NU0 1288 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CAMK1GQ96NX5 476 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 LYSMD1Q96S90 227 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 TLR10Q9BXR5 811 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CNTNAP3Q9BZ76 1288 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CARD9Q9H257 536 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 CHD8Q9HCK8 2581 aa16.03■□□□□ 0.16
ERGIC3-216ENST00000488384 EPG5Q9HCE0 2579 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 SPTY2D1-AS1A0A0U1RR47 76 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 GOLGA8CPA6NN73 597 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 FLRT2O43155 660 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PMPCBO75439 489 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 C1SP09871 688 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 KCNA4P22459 653 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 ETV3P41162 512 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 ARHGEF7Q14155 803 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PCSK7Q16549 785 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 DENND2CQ68D51 928 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 DARS2Q6PI48 645 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 KDELC1Q6UW63 502 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PID1Q7Z2X4 250 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 KANSL1Q7Z3B3 1105 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PARGQ86W56 976 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 GATAD2AQ86YP4 633 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC13A5Q86YT5 568 aaPredicted RBP16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 DCP2Q8IU60 420 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms