RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PPP1R21Q6ZMI0 780 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 GBP6Q6ZN66 633 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 RD3Q7Z3Z2 195 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 IQCHQ86VS3 1027 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 HOOK3Q86VS8 718 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 SCAIQ8N9R8 606 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 ZBTB44Q8NCP5 570 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 IPMKQ8NFU5 416 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
HFM1-208ENST00000488023 PTPMT1Q8WUK0 201 aaPredicted RBP3.67□□□□□ -1.82
HFM1-208ENST00000488023 SLC9A6Q92581 669 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 CAVIN3Q969G5 261 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 BOD1Q96IK1 185 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 GPR78Q96P69 363 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 FYTTD1Q96QD9 318 aaKnown RBP3.67□□□□□ -1.82
HFM1-208ENST00000488023 IWS1Q96ST2 819 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 PKP4Q99569 1192 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 SLC25A23Q9BV35 468 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 SCNM1Q9BWG6 230 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 GPR88Q9GZN0 384 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 PAG1Q9NWQ8 432 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 HAO2Q9NYQ3 351 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 CRNNQ9UBG3 495 aaPredicted RBP3.67□□□□□ -1.82
HFM1-208ENST00000488023 CPSF3Q9UKF6 684 aaKnown RBP3.67□□□□□ -1.82
HFM1-208ENST00000488023 MAP3K2Q9Y2U5 619 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 PKP3Q9Y446 797 aa3.67□□□□□ -1.82
HFM1-208ENST00000488023 A0A1B0GVM2 712 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 RGSL1A5PLK6 1076 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 MYADML2A6NDP7 307 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 TLR2O60603 784 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 NDUFS3O75489 264 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 REC8O95072 547 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 SPDEFO95238 335 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 PNPP00491 289 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 HEXAP06865 529 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 TPM2P07951 284 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 RHOP08100 348 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 EGR2P11161 476 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 PPP3CBP16298 524 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ZFXP17010 805 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 ITPKBP27987 946 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 SKIV2L2P42285 1042 aaKnown RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 KCNJ1P48048 391 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 JAK3P52333 1124 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 CAPSQ13938 189 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ERCC6LQ2NKX8 1250 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 C15orf59Q2T9L4 293 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 EDRF1Q3B7T1 1238 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ARL13AQ5H913 290 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 TREML2Q5T2D2 321 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 HMBOX1Q6NT76 420 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 TMEM270Q6UE05 265 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 LINC00696Q6ZRV3 163 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 GSTA5Q7RTV2 222 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 PRSS45Q7RTY3 260 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 SPATA19Q7Z5L4 167 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ADCK2Q7Z695 626 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 RABEPKQ7Z6M1 372 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 CNTN4Q8IWV2 1026 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 DHX40Q8IX18 779 aaKnown RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 IQUBQ8NA54 791 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 DENND1AQ8TEH3 1009 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ARHGEF26Q96DR7 871 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 NEK1Q96PY6 1258 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 CDRT15Q96T59 188 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 FERMT1Q9BQL6 677 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 H2AFJQ9BTM1 129 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 NUP85Q9BW27 656 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 TEX13BQ9BXU2 312 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 KRT23Q9C075 422 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 C1orf21Q9H246 121 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 R3HDMLQ9H3Y0 253 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 MRPL44Q9H9J2 332 aaKnown RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 SIRT3Q9NTG7 399 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 ABHD10Q9NUJ1 306 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 INTS10Q9NVR2 710 aaKnown RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 TMEM248Q9NWD8 314 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 DCAF16Q9NXF7 216 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 GDE1Q9NZC3 331 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 NINJ2Q9NZG7 142 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 CNIH4Q9P003 139 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 SEPT10Q9P0V9 454 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 MGAT4CQ9UBM8 478 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 ARMCX3Q9UH62 379 aaPredicted RBP3.66□□□□□ -1.82
HFM1-208ENST00000488023 KCNE5Q9UJ90 142 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 CMAHPQ9Y471 501 aa3.66□□□□□ -1.82
HFM1-208ENST00000488023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.66□□□□□ -1.827e-6■■□□□ 11.8
HFM1-208ENST00000488023 GPR75-ASB3A0A0A6YYF3 556 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 FAM237AA0A1B0GTK4 181 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 TARSL2A2RTX5 802 aaKnown RBP3.65□□□□□ -1.82
HFM1-208ENST00000488023 WIPF3A6NGB9 483 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 TTC36A6NLP5 189 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 NPIPB11E5RHQ5 1161 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 H3BQ06 376 aaPredicted RBP3.65□□□□□ -1.82
HFM1-208ENST00000488023 K7EPI3 171 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 PGRMC2O15173 223 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 VEGFDO43915 354 aa3.65□□□□□ -1.82
HFM1-208ENST00000488023 SMPD2O60906 423 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms