RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 SHROOM4Q9ULL8 1493 aa3.07□□□□□ -1.92
SMC4-220ENST00000488017 A0A0U1RQF3 1178 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 TCERG1O14776 1098 aaKnown RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 WDR1O75083 606 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 SRSF10O75494 262 aaKnown RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 TNNT1P13805 278 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 TRIM27P14373 513 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 PNLIPRP1P54315 467 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 SLC8A3P57103 927 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 GOLGA8FQ08AF8 430 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 PDCLQ13371 301 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 ITGA9Q13797 1035 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 STARD3Q14849 445 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 KRT24Q2M2I5 525 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 SIRPB2Q5JXA9 342 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 KLHL17Q6TDP4 642 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 CHD1LQ86WJ1 897 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 LURAP1LQ8IV03 231 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 WDR75Q8IWA0 830 aaKnown RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 CCDC117Q8IWD4 279 aaPredicted RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 ZNF473Q8WTR7 871 aaKnown RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 POM121L2Q96KW2 1035 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 SLC52A3Q9NQ40 469 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
SMC4-220ENST00000488017 FAM120CQ9NX05 1096 aaKnown RBP3.06□□□□□ -1.92
SMC4-220ENST00000488017 ZNF821O75541 412 aaPredicted RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 SORBS2O94875 1100 aaKnown RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 CSF1P09603 554 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 ERVK-10P10266 1014 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 DPEP1P16444 411 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 ABCB4P21439 1286 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 TECP42680 631 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 MCM2P49736 904 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 ZFP69Q49AA0 526 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 FBXO43Q4G163 708 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 RGMBQ6NW40 437 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 IL20RBQ6UXL0 311 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 PRSS45Q7RTY3 260 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 ANKRD13AQ8IZ07 590 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 PARD3BQ8TEW8 1205 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 GDPD5Q8WTR4 605 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 HSPH1Q92598 858 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 RND1Q92730 232 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 KTI12Q96EK9 354 aaPredicted RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 TRAPPC9Q96Q05 1148 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 SYT17Q9BSW7 474 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 POLR3CQ9BUI4 534 aaPredicted RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 TTC12Q9H892 705 aaPredicted RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 OBP2BQ9NPH6 170 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 CISD1Q9NZ45 108 aaKnown RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 TINAGQ9UJW2 476 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 DLGAP4Q9Y2H0 992 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 KLF2Q9Y5W3 355 aaPredicted RBP3.05□□□□□ -1.92
SMC4-220ENST00000488017 A3GALT2U3KPV4 340 aa3.05□□□□□ -1.92
SMC4-220ENST00000488017 ADGRF5Q8IZF2 1346 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 A8MU10 97 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 LGALS16A8MUM7 142 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 KLRF2D3W0D1 207 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 H7C423 109 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 FFAR2O15552 330 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 DCXO43602 365 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 PRKNO60260 465 aaPredicted RBP3.04□□□□□ -1.92
SMC4-220ENST00000488017 IGHV4-39P01824 125 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 PCNAP12004 261 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 PTPN2P17706 415 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 HOXC8P31273 242 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 EFNA5P52803 228 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 RAD23BP54727 409 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 SH2D4BQ5SQS7 431 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 FAM53AQ6NSI3 398 aaPredicted RBP3.04□□□□□ -1.92
SMC4-220ENST00000488017 ASB18Q6ZVZ8 466 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 FOXRED2Q8IWF2 684 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 SCCPDHQ8NBX0 429 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 AGBL3Q8NEM8 1001 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 GJC3Q8NFK1 279 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 DUSP19Q8WTR2 217 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 STAMBPL1Q96FJ0 436 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 CTDSP1Q9GZU7 261 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 UPF2Q9HAU5 1272 aaKnown RBP3.04□□□□□ -1.92
SMC4-220ENST00000488017 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 CD207Q9UJ71 328 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 C2CD2Q9Y426 696 aa3.04□□□□□ -1.92
SMC4-220ENST00000488017 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 A0A0G2JLW4 131 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 CBY3A6NI87 242 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 HSPB2A8KAH6 182 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 SH2B2O14492 632 aaPredicted RBP3.03□□□□□ -1.92
SMC4-220ENST00000488017 CAVIN2O95810 425 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 MYOD1P15172 320 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 GATA1P15976 413 aaPredicted RBP3.03□□□□□ -1.92
SMC4-220ENST00000488017 RRM1P23921 792 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 HNF1BP35680 557 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 AK2P54819 239 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 NR1H2P55055 460 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 TNFAIP2Q03169 654 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 GTF2H2Q13888 395 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 RUNX2Q13950 521 aa3.03□□□□□ -1.92
SMC4-220ENST00000488017 SMAD1Q15797 465 aaKnown RBP3.03□□□□□ -1.92
SMC4-220ENST00000488017 HSPB2Q16082 182 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms