RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PTPRRQ15256 657 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 SEPT7Q16181 437 aaKnown RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 MYLK3Q32MK0 819 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 PIGWQ7Z7B1 504 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 PLPP6Q8IY26 295 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 NAT16Q8N8M0 369 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 OR4K2Q8NGD2 314 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 OR6P1Q8NGX9 317 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 ECHDC3Q96DC8 303 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CDKN2AIPNLQ96HQ2 116 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CPEB1Q9BZB8 566 aaKnown RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 SUDS3Q9H7L9 328 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 MAGEE1Q9HCI5 957 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 FBXO6Q9NRD1 293 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 POLR3BQ9NW08 1133 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CLEC1BQ9P126 229 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 DCDC2Q9UHG0 476 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 CDH7Q9ULB5 785 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 SLC39A10Q9ULF5 831 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 ERVW-1Q9UQF0 538 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF711Q9Y462 761 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 A0A096LPK6 155 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 A0A0J9YYE9 177 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 OTOL1A6NHN0 477 aaPredicted RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 WASH3PC4AMC7 463 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 H7C0S8 307 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CD3EAPO15446 510 aaKnown RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 PLIN3O60664 434 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 TULP3O75386 442 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 TRBC1P01850 177 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SLC35E2BP0CK96 405 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 OGNP20774 298 aaKnown RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SERPINA4P29622 427 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 GMPRP36959 345 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 ABL2P42684 1182 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 DGKGP49619 791 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CLCN5P51795 746 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CCNHP51946 323 aaPredicted RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 FCHO2Q0JRZ9 810 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SEMA3AQ14563 771 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CARD16Q5EG05 197 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 N4BP2L1Q5TBK1 243 aaPredicted RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CGB2Q6NT52 195 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 CNSTQ6PJW8 725 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 AFTPHQ6ULP2 937 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 ZSWIM9Q86XI8 627 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 ARMC2Q8NEN0 867 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 OR4L1Q8NH43 312 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 LRRC8CQ8TDW0 803 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 WFIKKN2Q8TEU8 576 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 FRS2Q8WU20 508 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF75CPQ92670 426 aaPredicted RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 EID2BQ96D98 161 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 ZFYVE19Q96K21 471 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 C19orf43Q9BQ61 176 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
SF3B1-211ENST00000487698 S1PR5Q9H228 398 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 PRO3102Q9H379 93 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 EBF3Q9H4W6 596 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 HPS4Q9NQG7 708 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 IL17CQ9P0M4 197 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SIRPGQ9P1W8 387 aa9.46□□□□□ -0.9
SF3B1-211ENST00000487698 SZT2Q5T011 3432 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 PLXNB3Q9ULL4 1909 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 CAPN8A6NHC0 703 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 KLF11O14901 512 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 BIRC5O15392 142 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 TBX10O75333 385 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 PROCP04070 461 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 ALPIP09923 528 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 POLR2EP19388 210 aaKnown RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 HMGCLP35914 325 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 STC1P52823 247 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 EPHB1P54762 984 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 IRF9Q00978 393 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 POU4F1Q01851 419 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 ILF2Q12905 390 aaKnown RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 USP10Q14694 798 aaKnown RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 PDGFRLQ15198 375 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 DBN1Q16643 649 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 CDKN3Q16667 212 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 PTPRNQ16849 979 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 TANGO2Q6ICL3 276 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 MRNIPQ6NTE8 343 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 VITQ6UXI7 678 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 DPY19L3Q6ZPD9 716 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 Q6ZVU0 165 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 LYSMD3Q7Z3D4 306 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 LDB1Q86U70 411 aaPredicted RBP9.45□□□□□ -0.9
SF3B1-211ENST00000487698 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 SLC41A1Q8IVJ1 513 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 CEP97Q8IW35 865 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 PLD6Q8N2A8 252 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms