RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NR1I3Q14994 352 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 PNCKQ6P2M8 343 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 TAF8Q7Z7C8 310 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 MGAQ8IWI9 3026 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 PGBD5Q8N414 524 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 LZTR1Q8N653 840 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 PAF1Q8N7H5 531 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 Q8N9G6 341 aaPredicted RBP12.24□□□□□ -0.45
VPS16-208ENST00000487461 ZNF599Q96NL3 588 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 GFM1Q96RP9 751 aaKnown RBP12.24□□□□□ -0.45
VPS16-208ENST00000487461 TMEM168Q9H0V1 697 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 ISCUQ9H1K1 167 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 LRRN3Q9H3W5 708 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 FGF22Q9HCT0 170 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 B4GALT6Q9UBX8 382 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 PCDHGC4Q9Y5F7 938 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 H3BRJ5 948 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 TNFRSF10CO14798 259 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 HTRA2O43464 458 aaPredicted RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 NOBOXO60393 691 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 MAFKO60675 156 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 RPLP0P05388 317 aaKnown RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 MYBL1P10243 752 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 CR2P20023 1033 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 VAC14Q08AM6 782 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 ACOX1Q15067 660 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 TXNRD3NBQ6F5E7 133 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 CLEC14AQ86T13 490 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 CBARPQ8N350 705 aaPredicted RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 OR6C4Q8NGE1 309 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 CCL4L1Q8NHW4 92 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 SNRNP27Q8WVK2 155 aaKnown RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 HSPH1Q92598 858 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 LIN37Q96GY3 246 aaPredicted RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 COQ10AQ96MF6 247 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS16-208ENST00000487461 FOXP3Q9BZS1 431 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 ZWILCHQ9H900 591 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 NOD2Q9HC29 1040 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 CYP4F12Q9HCS2 524 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
VPS16-208ENST00000487461 SCINQ9Y6U3 715 aa12.23□□□□□ -0.45
VPS16-208ENST00000487461 D6RAR5 112 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 PLD2O14939 933 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 FUCA1P04066 466 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 ITGA2BP08514 1039 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 RARAP10276 462 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 KELP23276 732 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 UGT1A5P35504 534 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 ARL4AP40617 200 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
VPS16-208ENST00000487461 ZNF165P49910 485 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 INHBCP55103 352 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 RHDQ02161 417 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 CLN3Q13286 438 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 IQCB1Q15051 598 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 PTPRRQ15256 657 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 CNGA3Q16281 694 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
VPS16-208ENST00000487461 HGSNATQ68CP4 663 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 RAB11FIP2Q7L804 512 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 FBXO39Q8N4B4 442 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
VPS16-208ENST00000487461 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 TRIM11Q96F44 468 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
VPS16-208ENST00000487461 BTBD6Q96KE9 485 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 NUDCD1Q96RS6 583 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 EPB41L5Q9HCM4 733 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS16-208ENST00000487461 MOSPD1Q9UJG1 213 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 APPL1Q9UKG1 709 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
VPS16-208ENST00000487461 RNF215Q9Y6U7 377 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 UNC13CQ8NB66 2214 aa12.22□□□□□ -0.45
VPS16-208ENST00000487461 GCN1Q92616 2671 aaKnown RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 TMX2-CTNND1H3BSU7 103 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 K7ENP7 123 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 EFSO43281 561 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 HEXIM1O94992 359 aaKnown RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 HGFP14210 728 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 GLB1P16278 677 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 SLC5A2P31639 672 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 VIPR1P32241 457 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
VPS16-208ENST00000487461 MAXP61244 160 aa12.21□□□□□ -0.45
VPS16-208ENST00000487461 CFHR1Q03591 330 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms