RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 RHOJQ9H4E5 214 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 SLC25A13Q9UJS0 675 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 CHKBQ9Y259 395 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 FCF1Q9Y324 198 aaKnown RBP14.25□□□□□ -0.13
CUX1-209ENST00000487284 RAI2Q9Y5P3 530 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 MUC22E2RYF6 1773 aaPredicted RBP14.25□□□□□ -0.13
CUX1-209ENST00000487284 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 TCP11X1B4DZS4 312 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 SRCP12931 536 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 TAC1P20366 129 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 HADHAP40939 763 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 CSNK1DP48730 415 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 SERPINB8P50452 374 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 GALK1P51570 392 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 ECT2LQ008S8 904 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 PDE1BQ01064 536 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 PFKPQ01813 784 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 TRAF2Q12933 501 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 THOC5Q13769 683 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 SEPT7Q16181 437 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 QPCTQ16769 361 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 FSTL4Q6MZW2 842 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 KIAA0408Q6ZU52 694 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 SRLQ86TD4 932 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 NDUFAF2Q8N183 169 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 DCLK2Q8N568 766 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 C2CD4AQ8NCU7 369 aaPredicted RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 CALML6Q8TD86 181 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 GPR22Q99680 433 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 P2RY13Q9BPV8 354 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 PAIP2Q9BPZ3 127 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 IQCGQ9H095 443 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 FAM107BQ9H098 131 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 NSRP1Q9H0G5 558 aaKnown RBP14.24□□□□□ -0.13
CUX1-209ENST00000487284 VPS11Q9H270 941 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 SLC2A4RGQ9NR83 387 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 ELOVL2Q9NXB9 296 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.24□□□□□ -0.13
CUX1-209ENST00000487284 SLCO3A1Q9UIG8 710 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 DUSP12Q9UNI6 340 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 ERVW-1Q9UQF0 538 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 HS3ST2Q9Y278 367 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 PLLPQ9Y342 182 aa14.24□□□□□ -0.13
CUX1-209ENST00000487284 TBC1D3BA6NDS4 549 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 ANTXRLA6NF34 631 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 BMP1P13497 986 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 PSMA3P25788 255 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 GRIA2P42262 883 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 CCT5P48643 541 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 CSRP3P50461 194 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 PDE1CQ14123 709 aaPredicted RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 EIF4HQ15056 248 aaKnown RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 PTPRNQ16849 979 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 ZNF470Q6ECI4 717 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 NEPROQ6NW34 567 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 CPLX4Q7Z7G2 160 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 GALNT7Q86SF2 657 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 RALGPS2Q86X27 583 aaPredicted RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 DENND6AQ8IWF6 608 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 LMNTD2Q8IXW0 634 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 GABPB2Q8TAK5 448 aaPredicted RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 BLOC1S5Q8TDH9 187 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 PTPRN2Q92932 1015 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 MYO19Q96H55 970 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 MRGPRX3Q96LB0 322 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 FAM111AQ96PZ2 611 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 ADGRE3Q9BY15 652 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 C12orf65Q9H3J6 166 aaKnown RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 MFSD1Q9H3U5 465 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 C8orf33Q9H7E9 229 aaPredicted RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 SNX15Q9NRS6 342 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 FBXO5Q9UKT4 447 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 SORCS3Q9UPU3 1222 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 MTO1Q9Y2Z2 717 aaKnown RBP14.23□□□□□ -0.13
CUX1-209ENST00000487284 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 SPO11Q9Y5K1 396 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
CUX1-209ENST00000487284 FZD6O60353 706 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 GLRA3O75311 464 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 AHSGP02765 367 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 ASLP04424 464 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 APODP05090 189 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 PRKCGP05129 697 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 ATP5BP06576 529 aaKnown RBP14.22□□□□□ -0.13
CUX1-209ENST00000487284 PDHA1P08559 390 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 F7P08709 466 aaPredicted RBP14.22□□□□□ -0.13
CUX1-209ENST00000487284 DLDP09622 509 aaKnown RBP14.22□□□□□ -0.13
CUX1-209ENST00000487284 GABRB3P28472 473 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 TYK2P29597 1187 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 SLC1A2P43004 574 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 MAPK8P45983 427 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 ARSDP51689 593 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 PON2Q15165 354 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
CUX1-209ENST00000487284 FOXR1Q6PIV2 292 aa14.22□□□□□ -0.13
CUX1-209ENST00000487284 LPCAT1Q8NF37 534 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms