RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TIMMDC1Q9NPL8 285 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 MBNL1Q9NR56 388 aaKnown RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SAE1Q9UBE0 346 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PCOLCE2Q9UKZ9 415 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PNMA8BQ9ULN7 279 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TPX2Q9ULW0 747 aaKnown RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ATP8A1Q9Y2Q0 1164 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 DYRK1BQ9Y463 629 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 TTLL3Q9Y4R7 772 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PCDHGC4Q9Y5F7 938 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 HEY1Q9Y5J3 304 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 HRH3Q9Y5N1 445 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 ALG6Q9Y672 507 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 COL5A1P20908 1838 aaPredicted RBP7.21□□□□□ -1.26
UBE4B-209ENST00000487244 PLXNB3Q9ULL4 1909 aa7.21□□□□□ -1.26
UBE4B-209ENST00000487244 SCN8AQ9UQD0 1980 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 USP24Q9UPU5 2620 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ASXL3Q9C0F0 2248 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 A0A0A6YYK5 440 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 GRID2IPA4D2P6 1211 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 A6NNZ2 444 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF487B1APH4 448 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KCNK1O00180 336 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 APOL1O14791 398 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 MATN3O15232 486 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 HTRA2O43464 458 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PSTPIP1O43586 416 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PCDHGA12O60330 932 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PDHA1P08559 390 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 C6P13671 934 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 CCNB1P14635 433 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 GM2AP17900 193 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SPINK2P20155 84 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 XPAP23025 273 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 EPHA8P29322 1005 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PMLP29590 882 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 NUDT1P36639 197 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SLC1A1P43005 524 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 LIG3P49916 1009 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 RENBPP51606 427 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 VAV2P52735 878 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SIM1P81133 766 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 BCL2L1Q07817 233 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PPIDQ08752 370 aaKnown RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 NSUN2Q08J23 767 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 NIPAL4Q0D2K0 466 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 BNIP3Q12983 259 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SGCGQ13326 291 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 FZD2Q14332 565 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 GRM3Q14832 879 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 IRF4Q15306 451 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 TLR1Q15399 786 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 TAZQ16635 292 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 TMEM52BQ4KMG9 183 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SLC45A4Q5BKX6 768 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF542PQ5EBM4 170 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 CFAP58Q5T655 872 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KAZNQ674X7 775 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 BRAT1Q6PJG6 821 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KYAT3Q6YP21 454 aaKnown RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SPOCD1Q6ZMY3 1216 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 DBX2Q6ZNG2 339 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 Q6ZSR6 202 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KANSL1Q7Z3B3 1105 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 DAAM2Q86T65 1068 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 IQCHQ86VS3 1027 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 RFX6Q8HWS3 928 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PELI3Q8N2H9 469 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC57Q8N9N7 239 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 TP53I13Q8NBR0 393 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 CCNYQ8ND76 341 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 BAHD1Q8TBE0 780 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ARRDC2Q8TBH0 407 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 CXorf40AQ8TE69 158 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SAP25Q8TEE9 199 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PDCD6IPQ8WUM4 868 aaKnown RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 CENPTQ96BT3 561 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 HDAC11Q96DB2 347 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KLHDC7BQ96G42 594 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 OLFM3Q96PB7 478 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 TSGA13Q96PP4 275 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 SEMA3CQ99985 751 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 GDF3Q9NR23 364 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 GPR27Q9NS67 375 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 UCKL1Q9NWZ5 548 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 KLF15Q9UIH9 416 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 PCDHGA11Q9Y5H2 935 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 MYLKQ15746 1914 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 RP1P56715 2156 aa7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ARHGEF17Q96PE2 2063 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-209ENST00000487244 ZFC3H1O60293 1989 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 hCG_1818297A0A087WSY0 165 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 MACROD2A1Z1Q3 448 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 NPIPB15A6NHN6 443 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 BTNL10A8MVZ5 291 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 FLRT2O43155 660 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CST8O60676 142 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms