RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 C1orf74Q96LT6 269 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 WDR77Q9BQA1 342 aaPredicted RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 POLDIP3Q9BY77 421 aaKnown RBP5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 KLHL31Q9H511 634 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 NRIP3Q9NQ35 241 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 ANKRD10Q9NXR5 420 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 PCDHA12Q9UN75 941 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 TTLL3Q9Y4R7 772 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 RPS6KL1Q9Y6S9 549 aa5.14□□□□□ -1.59
PRPF38A-203ENST00000487160 KDM5CP41229 1560 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 FAM90A8PA6NJQ4 464 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 MDM4O15151 490 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 RGS11O94810 467 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 NKX2-2O95096 273 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 STARD3NLO95772 234 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 IFNA2P01563 188 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 FAM90A13PP0C7W8 464 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 FAM90A24PP0C7X0 464 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 AKR1B1P15121 316 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 CHRNB2P17787 502 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 AGAP20933 346 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 MCM3P25205 808 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 FAM27E3Q08E93 113 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 LAMB3Q13751 1172 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 SRSF7Q16629 238 aaKnown RBP eCLIP5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 SGO1Q5FBB7 561 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 CXorf66Q5JRM2 361 aaPredicted RBP5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 NUGGCQ68CJ6 796 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 HIST2H2BCQ6DN03 193 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 HIST2H2BDQ6DRA6 164 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 TMEM154Q6P9G4 183 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 SLC16A12Q6ZSM3 486 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 TEX45Q8NA69 505 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 SNRNP27Q8WVK2 155 aaKnown RBP5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 ZFYVE19Q96K21 471 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 MXD3Q9BW11 206 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 TASP1Q9H6P5 420 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 HEY2Q9UBP5 337 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 PRXQ9BXM0 1461 aa5.13□□□□□ -1.59
PRPF38A-203ENST00000487160 KIF14Q15058 1648 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CLTCQ00610 1675 aaKnown RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 ITSN2Q9NZM3 1697 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CDC42BPBQ9Y5S2 1711 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 TMEM272A0A1B0GTI8 110 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 A0A1W2PQ09 198 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 A8MZ25 164 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 B4DLN1 442 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 NDUFB8O95169 186 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CBSLP0DN79 551 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 GCH1P30793 250 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CBSP35520 551 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 MTX3Q5HYI7 312 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 ZNF626Q68DY1 528 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 SHC4Q6S5L8 630 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 GLDNQ6ZMI3 551 aaPredicted RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 QSOX2Q6ZRP7 698 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 HAPLN4Q86UW8 402 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 SLC35F3Q8IY50 421 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CCDC13Q8IYE1 715 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 TAGAPQ8N103 731 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 ZBTB2Q8N680 514 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 ENGASEQ8NFI3 743 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 HUS1BQ8NHY5 278 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 BICD2Q8TD16 824 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 GPT2Q8TD30 523 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 NTN5Q8WTR8 489 aaPredicted RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 SLC35F5Q8WV83 523 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 FBXL8Q96CD0 374 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 SERINC2Q96SA4 455 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 TRMOQ9BU70 441 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 MSTO1Q9BUK6 570 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 C1QTNF5Q9BXJ0 243 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 RANGRFQ9HD47 186 aaPredicted RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 DDX4Q9NQI0 724 aaKnown RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 PLSCR4Q9NRQ2 329 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 TRNAU1APQ9NX07 287 aaKnown RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 PTGFRNQ9P2B2 879 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 RPS6KA6Q9UK32 745 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 MTMR6Q9Y217 621 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CEPT1Q9Y6K0 416 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 SCAPERQ9BY12 1400 aa5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 CDK13Q14004 1512 aaKnown RBP5.12□□□□□ -1.59
PRPF38A-203ENST00000487160 LRRIQ1Q96JM4 1722 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 GAGE12JA6NER3 117 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 CHL1O00533 1208 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 ZC3H11AO75152 810 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 BEST1O76090 585 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 KLKB1P03952 638 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 MMP2P08253 660 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 ZNF182P17025 639 aaPredicted RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 GABRB1P18505 474 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 INHBEP58166 350 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SELENOVP59797 346 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 IFI35P80217 286 aaPredicted RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SORDQ00796 357 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 EPS8Q12929 822 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 RBMS2Q15434 407 aaKnown RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SHBQ15464 509 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 DUSP6Q16828 381 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms