RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 A0A0J9YYE9 177 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 A0A1W2PP55 124 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 A0A1W2PQ67 120 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 AXIN1O15169 862 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SPINT1O43278 529 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 TRBC1P01850 177 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 DNTTP04053 509 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 HLA-DPA1P20036 260 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 ECHS1P30084 290 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 HNF1BP35680 557 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 P2RY2P41231 377 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 EPHB1P54762 984 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-229ENST00000486665 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
HDAC6-229ENST00000486665 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 UGP2Q16851 508 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 MSS51Q4VC12 460 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 CERCAMQ5T4B2 595 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 CFAP58Q5T655 872 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 NAPEPLDQ6IQ20 393 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 ANO7Q6IWH7 933 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 BRAT1Q6PJG6 821 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 LINC00523Q86TU6 105 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 IFT20Q8IY31 132 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 AGGF1Q8N302 714 aaeCLIP12.83□□□□□ -0.36
HDAC6-229ENST00000486665 PGBD3Q8N328 593 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 PAF1Q8N7H5 531 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 FBXO25Q8TCJ0 367 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SERPINB12Q96P63 405 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SMOC1Q9H4F8 434 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 PCDH12Q9NPG4 1184 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 ITM2CQ9NQX7 267 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 FBXL12Q9NXK8 326 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
HDAC6-229ENST00000486665 SHOC2Q9UQ13 582 aa12.83□□□□□ -0.36
HDAC6-229ENST00000486665 A8MX80 341 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 RNASEH2AO75792 299 aaKnown RBP12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 APBB3O95704 486 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 FGF1P05230 155 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ADRB3P13945 408 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 MGAT1P26572 445 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 GRIA4P48058 902 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 TAS2R38P59533 333 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 POLR2LP62875 67 aaKnown RBP12.82□□□□□ -0.36
HDAC6-229ENST00000486665 SARNPP82979 210 aaKnown RBP12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 CDH17Q12864 832 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 CDKN3Q16667 212 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 AGBL4Q5VU57 503 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 FBXL19Q6PCT2 694 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 CEP68Q76N32 757 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 KBTBD6Q86V97 674 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 RASSF3Q86WH2 238 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 MPP5Q8N3R9 675 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 DNAAF3Q8N9W5 541 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 GANCQ8TET4 914 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 SCRN2Q96FV2 425 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 OMDQ99983 421 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ARRDC1-AS1Q9H2J1 176 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 DYRK4Q9NR20 520 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDAC6-229ENST00000486665 GGT7Q9UJ14 662 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ITM2BQ9Y287 266 aa12.82□□□□□ -0.36
HDAC6-229ENST00000486665 ASPMQ8IZT6 3477 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 NPIPB15A6NHN6 443 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 SMAPO00193 183 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 AURKAO14965 403 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 AREL1O15033 823 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 BANF1O75531 89 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 ACADMP11310 421 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 MLNP12872 115 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 KCNA4P22459 653 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 XPAP23025 273 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 HOXA6P31267 233 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CNR2P34972 360 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 MAGEA3P43357 314 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 NPY2RP49146 381 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 TPMTP51580 245 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 NEK3P51956 506 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 FAM193AP78312 1265 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CRADDP78560 199 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CAV1Q03135 178 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 DHX9Q08211 1270 aaKnown RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CRTC1Q6UUV9 634 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CCNI2Q6ZMN8 369 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 TSPAN33Q86UF1 283 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 FAM124AQ86V42 546 aa12.81□□□□□ -0.36
HDAC6-229ENST00000486665 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
HDAC6-229ENST00000486665 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms