RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SGCZQ96LD1 299 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 NT5C1BQ96P26 610 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 LGMNQ99538 433 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 ELF4Q99607 663 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SMOQ99835 787 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 TREX2Q9BQ50 279 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 MRPL46Q9H2W6 279 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 VCX3BQ9H321 246 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 XAB2Q9HCS7 855 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 C1GALT1Q9NS00 363 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 INTS10Q9NVR2 710 aaKnown RBP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.95□□□□□ -1.3
HDAC3-209ENST00000486618 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 NCKAP1Q9Y2A7 1128 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 JRKLQ9Y4A0 524 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 SNX8Q9Y5X2 465 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
HDAC3-209ENST00000486618 A0A1W2PQH9 124 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 LRRC10BA6NIK2 292 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 TULP2O00295 520 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 MDM4O15151 490 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 EIF3DO15371 548 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 CYP26A1O43174 497 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ARHGAP6O43182 974 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 KDM1AO60341 852 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF254O75437 659 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 BEST1O76090 585 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 S100A6P06703 90 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 PF4V1P10720 104 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC130P13994 396 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 PBLDP30039 288 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ATP5DP30049 168 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ARRB1P49407 418 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 PGFP49763 221 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 PEX5P50542 639 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 IL9RQ01113 521 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 IL1RL1Q01638 556 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 TLE3Q04726 772 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 DEUP1Q05D60 604 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 CYP24A1Q07973 514 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ADCY2Q08462 1091 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 TBC1D25Q3MII6 688 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 KRT71Q3SY84 523 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 FNDC3BQ53EP0 1204 aaKnown RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 MPPE1Q53F39 396 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 FKBP15Q5T1M5 1219 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 KIAA0895LQ68EN5 471 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 FBXL19Q6PCT2 694 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 LHFPL2Q6ZUX7 228 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 USP49Q70CQ1 688 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF765Q7L2R6 523 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 GATAD2AQ86YP4 633 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 UNC45BQ8IWX7 931 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SPACA3Q8IXA5 215 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 CPXM2Q8N436 756 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 EID2Q8N6I1 236 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF248Q8NDW4 579 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SLC30A5Q8TAD4 765 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 GANCQ8TET4 914 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 WFIKKN2Q8TEU8 576 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 DDI1Q8WTU0 396 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 GPATCH1Q9BRR8 931 aaKnown RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 FGFBP2Q9BYJ0 223 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 EDEM3Q9BZQ6 932 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 WDR12Q9GZL7 423 aaKnown RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 STMN4Q9H169 189 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 TNMDQ9H2S6 317 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SMYD3Q9H7B4 428 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 NMUR1Q9HB89 426 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ARFGAP3Q9NP61 516 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 GDF3Q9NR23 364 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 OSER1Q9NX31 292 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 NUDT5Q9UKK9 219 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SCML1Q9UN30 329 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SRPRBQ9Y5M8 271 aaKnown RBP6.94□□□□□ -1.3
HDAC3-209ENST00000486618 SLCO1B1Q9Y6L6 691 aa6.94□□□□□ -1.3
HDAC3-209ENST00000486618 A0A1W2PPC4 97 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 B8ZZF3 427 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 UBXN8O00124 270 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 AP3B1O00203 1094 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CACNB4O00305 520 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CLIC2O15247 247 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 AHCYL1O43865 530 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RNASEH1O60930 286 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PLATP00750 562 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 KLKB1P03952 638 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ATP5BP06576 529 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PDHA1P08559 390 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CKMT2P17540 419 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 LPOP22079 712 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 GLDCP23378 1020 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ADORA2BP29275 332 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CORO1AP31146 461 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ACADVLP49748 655 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms