RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GALNT15Q8N3T1 639 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 ARFGAP1Q8N6T3 406 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TMEM145Q8NBT3 493 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 C1orf54Q8WWF1 131 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 RAPGEF5Q92565 580 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 KLHDC7BQ96G42 594 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 BMFQ96LC9 184 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 HEMGNQ9BXL5 484 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 MAK16Q9BXY0 300 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 DPH5Q9H2P9 285 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 ERVMER34-1Q9H9K5 563 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 GGT7Q9UJ14 662 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 STAP1Q9ULZ2 295 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 HS3ST2Q9Y278 367 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FCF1Q9Y324 198 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 MYO18BQ8IUG5 2567 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TEP1Q99973 2627 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 IGLV3-10A0A075B6K4 115 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 POM121BA6NF01 834 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 GOLGA6L10A6NI86 522 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 APOC4-APOC2K7ER74 178 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 GPR37O15354 613 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 NEBLO76041 1014 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PCDH8O95206 1070 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PAK4O96013 591 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 APOC2P02655 101 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM153BP0C7A2 387 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 DGKAP23743 735 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 OR1E1P30953 314 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 GJC1P36383 396 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 EIF2S3P41091 472 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ARSEP51690 589 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF135P52742 658 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 SFSWAPQ12872 951 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM153CQ494X1 144 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 LRRC73Q5JTD7 316 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 BRMS1LQ5PSV4 323 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM46CQ5VWP2 391 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 C22orf39Q6P5X5 142 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 C4orf22Q6V702 233 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 TRMT10CQ7L0Y3 403 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PCGF5Q86SE9 256 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 HORMAD1Q86X24 394 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 RELL1Q8IUW5 271 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC35B2Q8TB61 432 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 SKA1Q96BD8 255 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PGAP3Q96FM1 320 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 CCDC114Q96M63 670 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF670Q9BS34 389 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 CALN1Q9BXU9 219 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 TXLNGYQ9BZA5 131 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 TM6SF2Q9BZW4 377 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 KDM4CQ9H3R0 1056 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ZWILCHQ9H900 591 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 GRHL1Q9NZI5 618 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 RCOR3Q9P2K3 495 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 DKK4Q9UBT3 224 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ASIC3Q9UHC3 531 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM153AQ9UHL3 310 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PNMA8BQ9ULN7 279 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 ITM2BQ9Y287 266 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 SNX24Q9Y343 169 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 NEU2Q9Y3R4 380 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PCDHB1Q9Y5F3 818 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
TMEM39A-208ENST00000486159 URB1O60287 2271 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 A0A087WV48 116 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 CFAP69A5D8W1 941 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PRAMEF26H0Y7S4 382 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 AGPSO00116 658 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ALOX15BO15296 676 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC7A4O43246 635 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SPINT1O43278 529 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SYF2O95926 243 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TCF4P15884 667 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 CKMT2P17540 419 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TGM2P21980 687 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 IL1R2P27930 398 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 HSD17B3P37058 310 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ADCY8P40145 1251 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ABL2P42684 1182 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ARRB1P49407 418 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 CCNHP51946 323 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PMS2P54278 862 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 PLTPP55058 493 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 DHX9Q08211 1270 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 SNX1Q13596 522 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 KRT81Q14533 505 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 TRADDQ15628 312 aa9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 OASLQ15646 514 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-208ENST00000486159 ATP13A4Q4VNC1 1196 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms