RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CNOT8Q9UFF9 292 aaKnown RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 MGAQ8IWI9 3026 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 ANKRD36A6QL64 1941 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 AGRPO00253 132 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 NOBOXO60393 691 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 LRCH4O75427 683 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 SLC5A2P31639 672 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 TRIM23P36406 574 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 POLR2LP62875 67 aaKnown RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 SLC10A7Q0GE19 358 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 DPYSQ14117 519 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 LBRQ14739 615 aaKnown RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 ACOX1Q15067 660 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 OGFOD3Q6PK18 319 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 CCDC81Q6ZN84 652 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 CCNJLQ8IV13 435 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 FNIP1Q8TF40 1166 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 STRADBQ9C0K7 418 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 RTN4Q9NQC3 1192 aaKnown RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 WDR70Q9NW82 654 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 B4GALT6Q9UBX8 382 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 SEPT3Q9UH03 358 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 MOSPD1Q9UJG1 213 aa19.3■□□□□ 0.68
COL27A1-205ENST00000485397 ATXN7L1Q9ULK2 861 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 HELZ2Q9BYK8 2649 aaKnown RBP19.3■□□□□ 0.68
COL27A1-205ENST00000485397 DDX3XO00571 662 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL27A1-205ENST00000485397 HOXC4P09017 264 aaPredicted RBP19.29■□□□□ 0.68
COL27A1-205ENST00000485397 KELP23276 732 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 HCAR3P49019 387 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 AP1S1P61966 158 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 TYRO3Q06418 890 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 EIF3IQ13347 325 aaKnown RBP19.29■□□□□ 0.68
COL27A1-205ENST00000485397 CERCAMQ5T4B2 595 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 PNCKQ6P2M8 343 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 JAMLQ86YT9 394 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 PSTKQ8IV42 348 aaKnown RBP19.29■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF653Q96CK0 615 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 PSKH2Q96QS6 385 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 CYP4F12Q9HCS2 524 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 MYO1AQ9UBC5 1043 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 PCDHGC4Q9Y5F7 938 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 RNF215Q9Y6U7 377 aa19.29■□□□□ 0.68
COL27A1-205ENST00000485397 B4DGG1 531 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 TMX2-CTNND1H3BSU7 103 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 TNFRSF10CO14798 259 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 EFSO43281 561 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 GZMAP12544 262 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 GLB1P16278 677 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 AMPD1P23109 780 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 IL1R2P27930 398 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 CCKBRP32239 447 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 RENBPP51606 427 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 C14orf28Q4W4Y0 310 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 CCDC183Q5T5S1 534 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 TMCO4Q5TGY1 634 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 COQ10AQ96MF6 247 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 TMEM74Q96NL1 305 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 DPEP2Q9H4A9 486 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 WDR26Q9H7D7 661 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 ETNK2Q9NVF9 386 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 AIPL1Q9NZN9 384 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 PISDQ9UG56 409 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 APPL1Q9UKG1 709 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 PCDHGA7Q9Y5G6 932 aa19.28■□□□□ 0.68
COL27A1-205ENST00000485397 UNC13CQ8NB66 2214 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 PEX11BO96011 259 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 SKILP12757 684 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 TCF4P15884 667 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF135P52742 658 aaPredicted RBP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 HLTFQ14527 1009 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 TGIF1Q15583 401 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 CNGA3Q16281 694 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 SMTNL2Q2TAL5 461 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 ANO6Q4KMQ2 910 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 SPECC1LQ69YQ0 1117 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 PGBD5Q8N414 524 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 LZTR1Q8N653 840 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 PDCD6IPQ8WUM4 868 aaKnown RBP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF599Q96NL3 588 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 CCNL2Q96S94 520 aaPredicted RBP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 SUDS3Q9H7L9 328 aaPredicted RBP19.27■□□□□ 0.68
COL27A1-205ENST00000485397 ZWILCHQ9H900 591 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 LRIT1Q9P2V4 623 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 LOXL2Q9Y4K0 774 aa19.27■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF462Q96JM2 2506 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 PRSS38A1L453 326 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 CAPN8A6NHC0 703 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 H3BRJ5 948 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 HTRA2O43464 458 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-205ENST00000485397 JMJD7P0C870 316 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 KRT10P13645 584 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 PNLIPP16233 465 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 ITIH1P19827 911 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 CR2P20023 1033 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
COL27A1-205ENST00000485397 PRKCIP41743 596 aa19.26■□□□□ 0.67
COL27A1-205ENST00000485397 ZFP36L1Q07352 338 aaKnown RBP19.26■□□□□ 0.67
COL27A1-205ENST00000485397 SRSF6Q13247 344 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms