RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	NNMT	P40261	264 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	RGS2	P41220	211 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	SNX16	P57768	344 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	NLRP5	P59047	1200 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	NIPAL4	Q0D2K0	466 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	CSTF3	Q12996	717 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	STK4	Q13043	487 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	MTA1	Q13330	715 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	ZNF585B	Q52M93	769 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	GPR139	Q6DWJ6	353 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	KLHL35	Q6PF15	583 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	RBM44	Q6ZP01	1051 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	RNF144B	Q7Z419	303 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	TEX11	Q8IYF3	940 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	EHBP1L1	Q8N3D4	1523 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	ADGB	Q8N7X0	1667 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	TMEM116	Q8NCL8	245 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	WIPF2	Q8TF74	440 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	FAR1	Q8WVX9	515 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	CAMK1G	Q96NX5	476 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	FCRL5	Q96RD9	977 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	SLF1	Q9BQI6	1058 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC32A1	Q9H598	525 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	PCDHB16	Q9NRJ7	776 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	C20orf141	Q9NUB4	165 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	DLGAP2	Q9P1A6	1054 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	ADAMTS7	Q9UKP4	1686 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	DIP2C	Q9Y2E4	1556 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	FAM237B	A0A1B0GVD1	139 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	INPPL1	O15357	1258 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RNMT	O43148	476 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	PAGE4	O60829	102 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	TACC1	O75410	805 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	NDUFS3	O75489	264 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	TMEM191B	P0C7N4	346 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	AKR1B1	P15121	316 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	TMEM11	P17152	192 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	SAT1	P21673	171 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	MAPK4	P31152	587 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	IDUA	P35475	653 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ACTN2	P35609	894 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	GPR12	P47775	334 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	SOX2	P48431	317 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	GNAQ	P50148	359 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	CLCNKB	P51801	687 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	OLIG2	Q13516	323 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RBMS2	Q15434	407 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RPE65	Q16518	533 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ARL13A	Q5H913	290 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ZNF667	Q5HYK9	610 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ISM2	Q6H9L7	571 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	SZRD1	Q7Z422	152 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	WDR5B	Q86VZ2	330 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	CHSY1	Q86X52	802 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	PLD5	Q8N7P1	536 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	MOAP1	Q96BY2	351 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	CMTM3	Q96MX0	182 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ASB2	Q96Q27	587 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	ASAH2	Q9NR71	780 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RRP7BP	Q9NSQ0	103 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	KLHL13	Q9P2N7	655 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	HDAC6	Q9UBN7	1215 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	HSPB7	Q9UBY9	170 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RPS6KA6	Q9UK32	745 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	SESN1	Q9Y6P5	492 aa		4.07	□□□□□ -1.76
VPS8-223	ENST00000485024	RERE	Q9P2R6	1566 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	PRDM15	P57071	1507 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	MST1R	Q04912	1400 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TNR	Q92752	1358 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	ZNF644	Q9H582	1327 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TCRBV7S3A2	A0A539	114 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	C17orf102	A2RUQ5	167 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	AGAP14	A8MT82	685 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	C17orf100	A8MU93	164 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	ADAM10	O14672	748 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TGFB1I1	O43294	461 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	DKC1	O60832	514 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	DDAH2	O95865	285 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	PLAU	P00749	431 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	HEXA	P06865	529 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	NR2F1	P10589	423 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TTK	P33981	857 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	ARSF	P54793	590 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TFAP4	Q01664	338 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	PRPF4B	Q13523	1007 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	MED22	Q15528	200 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	TXNDC8	Q6A555	127 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	NAA16	Q6N069	864 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC30A6	Q6NXT4	461 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	PDXDC1	Q6P996	788 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	AAGAB	Q6PD74	315 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	GPAT4	Q86UL3	456 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	DPP10	Q8N608	796 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	GDPD5	Q8WTR4	605 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	GTF3C6	Q969F1	213 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	YME1L1	Q96TA2	773 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms