RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 GIN1Q9NXP7 522 aa15.18■□□□□ 0.02
RXRA-203ENST00000484822 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 FAM240BA0A1B0GVZ2 78 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 H3BNX3 289 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 MT-ND1P03886 318 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 HOXB8P17481 243 aaPredicted RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 GUCA1AP43080 201 aaPredicted RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 ACLYP53396 1101 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 TPTEP56180 551 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PGBD2Q6P3X8 592 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 OR52K2Q8NGK3 314 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SHC3Q92529 594 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PDCD10Q9BUL8 212 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 ABCG8Q9H221 673 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.028e-7■■■■■ 28.3
RXRA-203ENST00000484822 SSR3Q9UNL2 185 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PLLPQ9Y342 182 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SQORQ9Y6N5 450 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 MOXD2PA6NHM9 499 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 CASTOR2A6NHX0 329 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 G3V2T6 193 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SLC9A3R1O14745 358 aaPredicted RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 CA12O43570 354 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 HPCAL1P37235 193 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PRMT2P55345 433 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 VWA5B1Q5TIE3 1220 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 TRMT11Q7Z4G4 463 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 PHF10Q8WUB8 498 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 EEF1AKMT1Q8WVE0 214 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 ATP13A1Q9HD20 1204 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 ABCB9Q9NP78 766 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 N6AMT1Q9Y5N5 214 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 H3BMM5 538 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SIN3BO75182 1162 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SIM2Q14190 667 aaPredicted RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 PCBP1Q15365 356 aaKnown RBP eCLIP15.17■□□□□ 0.024e-7■■■□□ 14.9
RXRA-203ENST00000484822 INTS11Q5TA45 600 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 LZTR1Q8N653 840 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 C1QTNF7Q9BXJ2 289 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 NKIRAS2Q9NYR9 191 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 TNPO3Q9Y5L0 923 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
RXRA-203ENST00000484822 LIN54Q6MZP7 749 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 TAF8Q7Z7C8 310 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PALB2Q86YC2 1186 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 TBC1D21Q8IYX1 336 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 LPGAT1Q92604 370 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 COPS4Q9BT78 406 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 SP140LQ9H930 580 aa15.17■□□□□ 0.02
RXRA-203ENST00000484822 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 WNT7AO00755 349 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ARPC4P59998 168 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 PTPN20Q4JDL3 420 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 RAB43Q86YS6 212 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 CBR4Q8N4T8 237 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 Q96MT0 163 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 BBS4Q96RK4 519 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 LGMNQ99538 433 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 TBC1D30Q9Y2I9 924 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 E7ENX8 843 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 FGFR1P11362 822 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ZNF143P52747 638 aaPredicted RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 TBX4P57082 545 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 TYSND1Q2T9J0 566 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 MTSS1LQ765P7 747 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 NETO2Q8NC67 525 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 FTHL17Q9BXU8 183 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 MCUBQ9NWR8 336 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ZNF224Q9NZL3 707 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 A8MX80 341 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 H7C0S8 307 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 AZIN1O14977 448 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 UMPSP11172 480 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 CREB1P16220 341 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ITGB5P18084 799 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 TUFMP49411 452 aaKnown RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 ZNF438Q7Z4V0 828 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 GALNT5Q7Z7M9 940 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 FBXO44Q9H4M3 255 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 AZGP1P25311 298 aaKnown RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 IRF8Q02556 426 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 COMMD2Q86X83 199 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 FAM126AQ9BYI3 521 aaPredicted RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 TLR8Q9NR97 1041 aaKnown RBP15.16■□□□□ 0.02
RXRA-203ENST00000484822 PRKAB1Q9Y478 270 aa15.16■□□□□ 0.02
RXRA-203ENST00000484822 ULK1O75385 1050 aa15.15■□□□□ 0.02
RXRA-203ENST00000484822 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
RXRA-203ENST00000484822 RASSF6Q6ZTQ3 369 aa15.15■□□□□ 0.02
RXRA-203ENST00000484822 APTXQ7Z2E3 356 aaKnown RBP15.15■□□□□ 0.02
RXRA-203ENST00000484822 GPATCH1Q9BRR8 931 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms