RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PDGFRAP16234 1089 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 DUSP1P28562 367 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 KHKP50053 298 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 GMFBP60983 142 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 SUMO2P61956 95 aaKnown RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TXNL4AP83876 142 aaKnown RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 MC2RQ01718 297 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 FPGSQ05932 587 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 KCNC3Q14003 757 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PTPAQ15257 358 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 SLC39A12Q504Y0 691 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 LY6G5CQ5SRR4 150 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PMS2CLQ68D20 193 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 HEPHL1Q6MZM0 1159 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM270Q6UE05 265 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PRSS45Q7RTY3 260 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 SPATA21Q7Z572 469 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM110Q86TL2 294 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 CAND1Q86VP6 1230 aaKnown RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 VRK3Q8IV63 474 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 MFN1Q8IWA4 741 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 MCEMP1Q8IX19 187 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 RNF168Q8IYW5 571 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 MB21D1Q8N884 522 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 CNNM3Q8NE01 707 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 SETD9Q8NE22 299 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 MDGA1Q8NFP4 955 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 TEKT4Q8WW24 435 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 GAL3ST4Q96RP7 486 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 ELOVL1Q9BW60 279 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 CADM1Q9BY67 442 aaKnown RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 HSD3B7Q9H2F3 369 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 KIF9Q9HAQ2 790 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 GLOD4Q9HC38 313 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 COMMD8Q9NX08 183 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 NINJ2Q9NZG7 142 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 VSX1Q9NZR4 365 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 RNF181Q9P0P0 153 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 VPS18Q9P253 973 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 ABI3Q9P2A4 366 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 HSFX1Q9UBD0 423 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 HDAC6Q9UBN7 1215 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 PLAGL1Q9UM63 463 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 DHDHQ9UQ10 334 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 AURKCQ9UQB9 309 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 AAR2Q9Y312 384 aaKnown RBP4.55□□□□□ -1.68
PTCD3-214ENST00000483925 NFS1Q9Y697 457 aa4.55□□□□□ -1.68
PTCD3-214ENST00000483925 A0A1B0GVM2 712 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 OR6C68A6NDL8 312 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 MYADML2A6NDP7 307 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 TMPRSS11DO60235 418 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PALMO75781 387 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 RECQL4O94761 1208 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 REC8O95072 547 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 APBB3O95704 486 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 GPANK1O95872 356 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 ZFYP08048 801 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CREB1P16220 341 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 ARF4P18085 180 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CCNA2P20248 432 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 FBLP22087 321 aaKnown RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 GPTP24298 496 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 HSPA4P34932 840 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PRKCIP41743 596 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 KIAA1024LP59773 190 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PPATQ06203 517 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CCDC15Q0P6D6 951 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PPIGQ13427 754 aaKnown RBP eCLIP4.54□□□□□ -1.683e-8■□□□□ 10.1
PTCD3-214ENST00000483925 RNPS1Q15287 305 aaKnown RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CSRP2Q16527 193 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 SNAPC1Q16533 368 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CCDC142Q17RM4 750 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 C1QL3Q5VWW1 255 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 DENND2CQ68D51 928 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 NAIF1Q69YI7 327 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 MOXD1Q6UVY6 613 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CFAP77Q6ZQR2 320 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 ZER1Q7Z7L7 766 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 GPAT4Q86UL3 456 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 DTX2Q86UW9 622 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CNTN4Q8IWV2 1026 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 ADGRG5Q8IZF4 528 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 OTUD6BQ8N6M0 293 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PNPLA1Q8N8W4 532 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CCDC110Q8TBZ0 833 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PROKR1Q8TCW9 393 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 SOCS4Q8WXH5 440 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 TEKT1Q969V4 418 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 EEF2KMTQ96G04 330 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 HES6Q96HZ4 224 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 GLIS2Q9BZE0 524 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 GPR88Q9GZN0 384 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 MMP27Q9H306 513 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 USP29Q9HBJ7 922 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 MAGEE1Q9HCI5 957 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 SETD4Q9NVD3 440 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 HAO2Q9NYQ3 351 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PLK2Q9NYY3 685 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms