RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
COL2A1-206ENST00000483376 FSCN3Q9NQT6 498 aa16.32■□□□□ 0.2
COL2A1-206ENST00000483376 KCND1Q9NSA2 647 aa16.32■□□□□ 0.2
COL2A1-206ENST00000483376 FAM153AQ9UHL3 310 aa16.32■□□□□ 0.2
COL2A1-206ENST00000483376 CHKBQ9Y259 395 aa16.32■□□□□ 0.2
COL2A1-206ENST00000483376 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 TCRBV7S2A1N4TA0A589 114 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 NPIPB15A6NHN6 443 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 C4orf47A7E2U8 309 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 KIF5CO60282 957 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 PRKCGP05129 697 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 GM2AP17900 193 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 NFKB1P19838 968 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 TEAD1P28347 426 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 STIP1P31948 543 aaKnown RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 HNF1BP35680 557 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 IGFALSP35858 605 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 EPHB1P54762 984 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 CDK18Q07002 472 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 MPP3Q13368 585 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 LRRC14Q15048 493 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 OASLQ15646 514 aaKnown RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 QPCTQ16769 361 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 KDELC1Q6UW63 502 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 LAYNQ6UX15 382 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 SPATS2Q86XZ4 545 aaKnown RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 RMDN1Q96DB5 314 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 SPATA13Q96N96 652 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 GAREM1Q9H706 876 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 TTC7AQ9ULT0 858 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 R3HDM2Q9Y2K5 976 aaKnown RBP16.31■□□□□ 0.2
COL2A1-206ENST00000483376 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
COL2A1-206ENST00000483376 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 POM121BA6NF01 834 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 H0Y8X5 98 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 CES2O00748 559 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 KCNN4O15554 427 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 LIASO43766 372 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 LZTS3O60299 673 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 GCATO75600 419 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ANXA9O76027 345 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 RECQL5O94762 991 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 NDST3O95803 873 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 MT-CYBP00156 380 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 HOXC4P09017 264 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 THEGLP0DJG4 465 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 MTM1Q13496 603 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ARHGEF7Q14155 803 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 CDKN3Q16667 212 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ANKRD20A3Q5VUR7 823 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ESRP1Q6NXG1 681 aaKnown RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 CRTC1Q6UUV9 634 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 RASGEF1CQ8N431 466 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 SPATA22Q8NHS9 363 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 MLPHQ9BV36 600 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-206ENST00000483376 MAGEE1Q9HCI5 957 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 CABIN1Q9Y6J0 2220 aa16.3■□□□□ 0.2
COL2A1-206ENST00000483376 ASCC3Q8N3C0 2202 aaKnown RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 SPTY2D1-AS1A0A0U1RR47 76 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 RGSL1A5PLK6 1076 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 TRIM23P36406 574 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 ARRB1P49407 418 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 CCT8P50990 548 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 STC1P52823 247 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 CLDN2P57739 230 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 DPTQ07507 201 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 IRF4Q15306 451 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 CCNG2Q16589 344 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 Q6ZSR6 202 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 ZNF765Q7L2R6 523 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 TECPR1Q7Z6L1 1165 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 PIP4P1Q86T03 277 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 SLC22A18ASQ8N1D0 253 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 LPCAT1Q8NF37 534 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 OXNAD1Q96HP4 312 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 PBKQ96KB5 322 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 MBNL1Q9NR56 388 aaKnown RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 TM7SF3Q9NS93 570 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 CA5BQ9Y2D0 317 aa16.29■□□□□ 0.2
COL2A1-206ENST00000483376 FNDC3AQ9Y2H6 1198 aaKnown RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 AAR2Q9Y312 384 aaKnown RBP16.29■□□□□ 0.2
COL2A1-206ENST00000483376 ITGAVP06756 1048 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 ALPIP09923 528 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 CD59P13987 128 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 CTPS1P17812 591 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms