RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 ACOX1Q15067 660 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 TAZQ16635 292 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 RALGPS1Q5JS13 557 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 DARS2Q6PI48 645 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 USP45Q70EL2 814 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 NDUFAF2Q8N183 169 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 TEX26Q8N6G2 289 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 C1orf216Q8TAB5 229 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 NSMCE3Q96MG7 304 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 OLFM3Q96PB7 478 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 RBM15Q96T37 977 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 ORAI3Q9BRQ5 295 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 RTKNQ9BST9 563 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 BRD8Q9H0E9 1235 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 C10orf88Q9H8K7 445 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 IL21RQ9HBE5 538 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 GDF3Q9NR23 364 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 MAP10Q9P2G4 905 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 RALYQ9UKM9 306 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 PHTF1Q9UMS5 762 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 FNDC3AQ9Y2H6 1198 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 CEP250Q9BV73 2442 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
SPTLC1-206ENST00000482632 A0A1W2PQ67 120 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 TLR4O00206 839 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 TRAFD1O14545 582 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 VILLO15195 856 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 RAD51BO15315 384 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 STK10O94804 968 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PGLSO95336 258 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 ALPIP09923 528 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 CES1P23141 567 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PTPN3P26045 913 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 VIPR1P32241 457 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PEX5P50542 639 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 CCT8P50990 548 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 SUOXP51687 545 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 LIMK1P53667 647 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 BNC1Q01954 994 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 NIPAL4Q0D2K0 466 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PRKD1Q15139 912 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 NOMO1Q15155 1222 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 RPS6KA1Q15418 735 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 TMEM52BQ4KMG9 183 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PID1Q7Z2X4 250 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 ZSCAN30Q86W11 494 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 CDKL3Q8IVW4 592 aaPredicted RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 MFSD2AQ8NA29 543 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 DEFB124Q8NES8 71 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 HCAR2Q8TDS4 363 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 SETD7Q8WTS6 366 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 FATE1Q969F0 183 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 VOPP1Q96AW1 172 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 QKIQ96PU8 341 aaKnown RBP eCLIP10.04□□□□□ -0.86e-7■■□□□ 12.6
SPTLC1-206ENST00000482632 IL12RB2Q99665 862 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 HERPUD2Q9BSE4 406 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 PCDH9Q9HC56 1237 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 TRMT1Q9NXH9 659 aaKnown RBP10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 UBP1Q9NZI7 540 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 B4GALT6Q9UBX8 382 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 AMACRQ9UHK6 382 aa10.04□□□□□ -0.8
SPTLC1-206ENST00000482632 A0A1W2PR77 199 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 POM121BA6NF01 834 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 KCNN4O15554 427 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 MTSS1O43312 755 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 HTRA2O43464 458 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 SDC3O75056 442 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 PMPCBO75439 489 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 S1PR4O95977 384 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 PDHA1P08559 390 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 RBP3P10745 1247 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 NFKB1P19838 968 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 RBL1P28749 1068 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 CTSKP43235 329 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 THOP1P52888 689 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 GALNT3Q14435 633 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 LRRC14Q15048 493 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 PTPRRQ15256 657 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 IRF4Q15306 451 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 TEX44Q53QW1 395 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 LIPIQ6XZB0 460 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 KDM7AQ6ZMT4 941 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 GCNT7Q6ZNI0 430 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 Q6ZSR6 202 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 DPPA4Q7L190 304 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 TRIM58Q8NG06 486 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 SPATA22Q8NHS9 363 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 HTR3CQ8WXA8 447 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 ECHDC3Q96DC8 303 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 HES6Q96HZ4 224 aa10.03□□□□□ -0.8
SPTLC1-206ENST00000482632 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms