RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FGF1P05230 155 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ELFN1P0C7U0 828 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 HLA-DPA1P20036 260 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 LHCGRP22888 699 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 HOXA6P31267 233 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 DHPSP49366 369 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 LIG3P49916 1009 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 SESN2P58004 480 aaPredicted RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ARHGEF7Q14155 803 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 POU6F1Q14863 301 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ACOX1Q15067 660 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CNGA3Q16281 694 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 LRRC66Q68CR7 880 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 NAPEPLDQ6IQ20 393 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 DPPA4Q7L190 304 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 LYSMD3Q7Z3D4 306 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 OR2T34Q8NGX1 318 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CCHCR1Q8TD31 782 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 RAB7BQ96AH8 199 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 SNF8Q96H20 258 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 HSPA12BQ96MM6 686 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 GPR63Q9BZJ6 419 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 CD84Q9UIB8 345 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 TPX2Q9ULW0 747 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 UTP11Q9Y3A2 253 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ZNF711Q9Y462 761 aa13.27□□□□□ -0.29
HDAC1-208ENST00000482310 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.29
HDAC1-208ENST00000482310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-208ENST00000482310 AURKAO14965 403 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 AREL1O15033 823 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 LZTS3O60299 673 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-208ENST00000482310 IGLV3-19P01714 112 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 C6P13671 934 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 TPSB2P20231 275 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 NFKBIAP25963 317 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 MAOBP27338 520 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ITGA8P53708 1063 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 CRADDP78560 199 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ZNF528Q3MIS6 628 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 CCDC38Q502W7 563 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 CERCAMQ5T4B2 595 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 RNASEH2BQ5TBB1 312 aaKnown RBP13.26□□□□□ -0.29
HDAC1-208ENST00000482310 KIAA0895LQ68EN5 471 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 CRTC1Q6UUV9 634 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 RANBP10Q6VN20 620 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 SLC36A4Q6YBV0 504 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 RFLNAQ6ZTI6 216 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ASCL5Q7RTU5 278 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 GLT6D1Q7Z4J2 308 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 LINC00523Q86TU6 105 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 PPIL6Q8IXY8 311 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 MMGT1Q8N4V1 131 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 HCAR2Q8TDS4 363 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 PWWP2AQ96N64 755 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 RAB17Q9H0T7 212 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 MIR1-1HGQ9H1L0 117 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 PREBQ9HCU5 417 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 BPIFA1Q9NP55 256 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 RRAGDQ9NQL2 400 aaPredicted RBP13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
HDAC1-208ENST00000482310 ARL5AQ9Y689 179 aa13.26□□□□□ -0.29
HDAC1-208ENST00000482310 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 CCDC163A0A0D9SF12 145 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 ERI2A8K979 691 aaKnown RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 SLC31A1O15431 190 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 TSPAN6O43657 245 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 AP1G1O43747 822 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 AVILO75366 819 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 BANF1O75531 89 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 C1SP09871 688 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 TMPRSS15P98073 1019 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 GUCY2DQ02846 1103 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 SIM2Q14190 667 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 PTPRCAPQ14761 206 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 TRADDQ15628 312 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 ALS2CLQ60I27 953 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 LIPIQ6XZB0 460 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 MICALCLQ6ZW33 695 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 HSD11B1LQ7Z5J1 315 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 HORMAD1Q86X24 394 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 RGL4Q8IZJ4 473 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 FAM131CQ96AQ9 280 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 SCRN2Q96FV2 425 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 PRRX2Q99811 253 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms