RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 LRRC40Q9H9A6 602 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 ACAD8Q9UKU7 415 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 SNX24Q9Y343 169 aa11.65□□□□□ -0.54
HPS4-212ENST00000481910 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 LOC285095A0A1B0GVY8 99 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 A0A1W2PQ67 120 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 C16orf96A6NNT2 1141 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 PLK4O00444 970 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 DNALI1O14645 258 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 FZD6O60353 706 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 USP12O75317 370 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 KIAA0754O94854 1291 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 AP2A1O95782 977 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 EPOP01588 193 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 MYCLP1P12525 358 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 ENPP1P22413 925 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ITGB7P26010 798 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 GUCY2DQ02846 1103 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ZBTB16Q05516 673 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 OLIG2Q13516 323 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 DUPD1Q68J44 220 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 NAPEPLDQ6IQ20 393 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ARHGAP22Q7Z5H3 698 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 KLHDC8BQ8IXV7 354 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 PPIL6Q8IXY8 311 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 HDDC3Q8N4P3 179 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 LPCAT1Q8NF37 534 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 MDGA1Q8NFP4 955 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 GABPB2Q8TAK5 448 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 HCAR2Q8TDS4 363 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 GANCQ8TET4 914 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ARRDC3Q96B67 414 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 FEM1CQ96JP0 617 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RUFY1Q96T51 708 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 OMDQ99983 421 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 TBL1YQ9BQ87 522 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 APOL2Q9BQE5 337 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RHOXF2Q9BQY4 288 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 FBXL12Q9NXK8 326 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 DKK3Q9UBP4 350 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 SCML1Q9UN30 329 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ZDBF2Q9HCK1 2354 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 A0A1W2PP55 124 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 TCRBV7S3A2A0A539 114 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 FAM86C2PA6NEL3 165 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ANKRD66B4E2M5 251 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 KDM1AO60341 852 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 SLC34A2O95436 690 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 APBB3O95704 486 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 NDST3O95803 873 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 XPAP23025 273 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 ADRA1AP35348 466 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RPL21P46778 160 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 TUBB4BP68371 445 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 CALCOCO2Q13137 446 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 GALNT3Q14435 633 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 KCNJ11Q14654 390 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 SLC1A5Q15758 541 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 UGP2Q16851 508 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 RNASEH2BQ5TBB1 312 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 ANKRD22Q5VYY1 191 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RANBP10Q6VN20 620 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 KRT77Q7Z794 578 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 LINC00523Q86TU6 105 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ZSWIM9Q86XI8 627 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 NDUFAF2Q8N183 169 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 SLC25A41Q8N5S1 370 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 AADATQ8N5Z0 425 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 PIH1D2Q8WWB5 315 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 TRIB3Q96RU7 358 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 SLC39A3Q9BRY0 314 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 PABPC3Q9H361 631 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 EPB41L5Q9HCM4 733 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 EIF2B3Q9NR50 452 aaKnown RBP11.64□□□□□ -0.55
HPS4-212ENST00000481910 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 SLC30A1Q9Y6M5 507 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
HPS4-212ENST00000481910 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 SUN1O94901 812 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 TIMP2P16035 220 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 ITIH2P19823 946 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 TPSB2P20231 275 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 AVPR2P30518 371 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 DRD3P35462 400 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 GRIA1P42261 906 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 MAGEA6P43360 314 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 CHRNA4P43681 627 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms