RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KIAA1211LQ6NV74 962 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 PARS2Q7L3T8 475 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 UBALD2Q8IYN6 164 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 STYXQ8WUJ0 223 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 CERS2Q96G23 380 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 PPP1R16AQ96I34 528 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 SHDQ96IW2 340 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 DNAJC1Q96KC8 554 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 MCCC1Q96RQ3 725 aaPredicted RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 LYSMD1Q96S90 227 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 CYTH2Q99418 400 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 ACBD3Q9H3P7 528 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 PPANQ9NQ55 473 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 SMYD2Q9NRG4 433 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 C20orf96Q9NUD7 363 aaPredicted RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 IL1RAPL1Q9NZN1 696 aa17.62■□□□□ 0.41
UPF3A-206ENST00000480362 MRPS17Q9Y2R5 130 aaKnown RBP17.62■□□□□ 0.41
UPF3A-206ENST00000480362 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 C1orf232A0A0U1RR37 186 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 EXOC1LA0A1B0GW35 172 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 TLDC2A0PJX2 215 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 NPIPB15A6NHN6 443 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 FAM159BA6NKW6 160 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 POC1B-GALNT4F8VUJ3 575 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 VAPBO95292 243 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 CLDN7O95471 211 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 C1QAP02745 245 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ERVK-10P10266 1014 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 CHRNB1P11230 501 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 CYP2A6P11509 494 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 PAMP19021 973 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 COL9A1P20849 921 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 NFKBIAP25963 317 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ZNF140P52738 457 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 PDE1BQ01064 536 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 SATB1Q01826 763 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 MGAT5Q09328 741 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 EFTUD2Q15029 972 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■□□ 15.3
UPF3A-206ENST00000480362 SMAD1Q15797 465 aaKnown RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 CDKN3Q16667 212 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 KLHL38Q2WGJ6 581 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 EOGTQ5NDL2 527 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 KIAA0930Q6ICG6 404 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 CRTC1Q6UUV9 634 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ZNF687Q8N1G0 1237 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 OR4K2Q8NGD2 314 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 OR13C4Q8NGS5 318 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 OR13J1Q8NGT2 312 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 OR2T3Q8NH03 318 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 PEX13Q92968 403 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 TMEM109Q9BVC6 243 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ROPN1BQ9BZX4 212 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ROPN1Q9HAT0 212 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ZFYVE1Q9HBF4 777 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 PCDH12Q9NPG4 1184 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 DYRK4Q9NR20 520 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 NLE1Q9NVX2 485 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-206ENST00000480362 B4GALT6Q9UBX8 382 aa17.61■□□□□ 0.41
UPF3A-206ENST00000480362 ATG2BQ96BY7 2078 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 A0A1W2PQF6 199 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 SMIM23A6NLE4 172 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 CXorf49A8MYA2 514 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 PLK4O00444 970 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 CCL22O00626 93 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 RASGRF2O14827 1237 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 STX7O15400 261 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 TCEA3O75764 348 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 RPP40O75818 363 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 TARSP26639 723 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 ARCN1P48444 511 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 ARSDP51689 593 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 COPAP53621 1224 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 RPS14P62263 151 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 ACVR1Q04771 509 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 CST6Q15828 149 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 ZNF776Q68DI1 518 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 FBXL19Q6PCT2 694 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 TSPAN33Q86UF1 283 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 KCNMB4Q86W47 210 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 CTAGE3PQ8IX95 158 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 GJD3Q8N144 294 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 SIX5Q8N196 739 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 PPM1NQ8N819 430 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 EPS8L3Q8TE67 593 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 HDAC10Q969S8 669 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 EID2BQ96D98 161 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 MRRFQ96E11 262 aaKnown RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 TBATAQ96M53 351 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 FBRSQ9HAH7 460 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 BPIFA1Q9NP55 256 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 POLR3BQ9NW08 1133 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 VPS18Q9P253 973 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 MTF2Q9Y483 593 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-206ENST00000480362 CKAP5Q14008 2032 aa17.6■□□□□ 0.41
UPF3A-206ENST00000480362 KANSL1LA0AUZ9 987 aa17.59■□□□□ 0.41
UPF3A-206ENST00000480362 GOLGA8KD6RF30 607 aa17.59■□□□□ 0.41
UPF3A-206ENST00000480362 GOLGA8TH3BQL2 631 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms