RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 NANOGP8Q6NSW7 305 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ESRP1Q6NXG1 681 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ERMP1Q7Z2K6 904 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SPPL2CQ8IUH8 684 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 PBXIP1Q96AQ6 731 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 THAP11Q96EK4 314 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ATXN3LQ9H3M9 355 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 CHST12Q9NRB3 414 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ST3GAL5Q9UNP4 418 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 C17orf102A2RUQ5 167 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 J3QRK9 145 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 GIPC1O14908 333 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 PORP16435 677 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 OXTRP30559 389 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 SOX11P35716 441 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 RAB39AQ14964 217 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM110CQ1W6H9 321 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 RWDD4Q6NW29 188 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 FUNDC1Q8IVP5 155 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 OR2T34Q8NGX1 318 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 FBXL8Q96CD0 374 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 TCF12Q99081 682 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 MTF2Q9Y483 593 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 NRP2O60462 931 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 NPHS1O60500 1241 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 FUCA1P04066 466 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 STMN1P16949 149 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 UGT1A1P22309 533 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 UGT1A4P22310 534 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 UGT1A3P35503 534 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 UGT1A5P35504 534 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 PRKAA2P54646 552 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 MERTKQ12866 999 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 CSHL1Q14406 222 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 SQLEQ14534 574 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 SELENONQ9NZV5 590 aa13.36□□□□□ -0.27
PDZRN3-208ENST00000479530 LAMA2P24043 3122 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ARL5CA6NH57 179 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 DFFAO00273 331 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 NME4O00746 187 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 UBFD1O14562 309 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ZBTB11O95625 1053 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 POMCP01189 267 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CHRM3P20309 590 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MYF6P23409 242 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC1A2P43004 574 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 RELAQ04206 551 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ZNF789Q5FWF6 425 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 NOMO2Q5JPE7 1267 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 RAB41Q5JT25 222 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 SAMD4BQ5PRF9 694 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MORN1Q5T089 497 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 RBM20Q5T481 1227 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CUZD1Q86UP6 607 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 STON2Q8WXE9 905 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 DPF3Q92784 378 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 PLEKHA8Q96JA3 519 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ELMO2Q96JJ3 720 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 C3orf30Q96M34 536 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MEAF6Q9HAF1 191 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 OAZ3Q9UMX2 235 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 PTGDR2Q9Y5Y4 395 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 SRP72O76094 671 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 INHBBP09529 407 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ALDOCP09972 364 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 NPY2RP49146 381 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 GALNT2Q10471 571 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ATP1A4Q13733 1029 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 SPRYD7Q5W111 196 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 DCDC5Q6ZRR9 648 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 RNF34Q969K3 372 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 MYLPFQ96A32 169 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 NTAN1Q96AB6 310 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
PDZRN3-208ENST00000479530 KIFC1Q9BW19 673 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms