RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CEP70Q8NHQ1 597 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 MAELQ96JY0 434 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 UBXN10Q96LJ8 280 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 SERPINI1Q99574 410 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 CCDC28BQ9BUN5 200 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 FAM192AQ9GZU8 254 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 GSTO2Q9H4Y5 243 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 EFCAB1Q9HAE3 211 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 SCML2Q9UQR0 700 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 FNDC3AQ9Y2H6 1198 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 PCDHGA7Q9Y5G6 932 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 PTPRDP23468 1912 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 H3BMM5 538 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 ACOT8O14734 319 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 SEPT4O43236 478 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 NPHS1O60500 1241 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 GOT2P00505 430 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 DNAJB2P25686 324 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 PRAMEP78395 509 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 MYBPC1Q00872 1141 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS52-217ENST00000478934 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 MFSD14CQ5VZR4 134 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 NADSYN1Q6IA69 706 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 BEND5Q7L4P6 421 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 PIWIL4Q7Z3Z4 852 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 COLGALT2Q8IYK4 626 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 PGAM4Q8N0Y7 254 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 GRIN3AQ8TCU5 1115 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 SEPT5Q99719 369 aaPredicted RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
VPS52-217ENST00000478934 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 IKZF3Q9UKT9 509 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 LZTS1Q9Y250 596 aa10.84□□□□□ -0.67
VPS52-217ENST00000478934 CCDC162PA2VCL2 907 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 MROH6A6NGR9 719 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 KPNA6O60684 536 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 TADA2AO75478 443 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 RHOQP17081 205 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 TYMPP19971 482 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 OR1E1P30953 314 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 CDKN1CP49918 316 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 PSME3P61289 254 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 ECT2LQ008S8 904 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 GRM2Q14416 872 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 POLD3Q15054 466 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 CYTH1Q15438 398 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 CTXN3Q4LDR2 81 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 AGAP9Q5VTM2 703 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 AMIGO2Q86SJ2 522 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 SAPCD2Q86UD0 394 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PDCD6IPQ8WUM4 868 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 LRTOMTQ8WZ04 291 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 FBXO32Q969P5 355 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 C1orf74Q96LT6 269 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 ARNT2Q9HBZ2 717 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 RGS18Q9NS28 235 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 POLR3BQ9NW08 1133 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 TMEM248Q9NWD8 314 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 MARCH2Q9P0N8 246 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 TRAF6Q9Y4K3 522 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 MYO16Q9Y6X6 1858 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PRORSD1PA6NEY8 169 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 UBXN8O00124 270 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 UBDO15205 165 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 ZNF189O75820 626 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 VNN2O95498 520 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 TFAP2AP05549 437 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 ALDOCP09972 364 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 BMP1P13497 986 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 RGRP47804 291 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 DNAJB13P59910 316 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 SH3BP2P78314 561 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 FASTKQ14296 549 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 OR4D1Q15615 310 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 SLC5A9Q2M3M2 681 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 C11orf91Q3C1V1 193 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 MGAT5BQ3V5L5 792 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 UNC50Q53HI1 259 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 RARS2Q5T160 578 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 CCSAPQ6IQ19 270 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 APLFQ8IW19 511 aaPredicted RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 OR7D4Q8NG98 312 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 RPL10LQ96L21 214 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PRKD2Q9BZL6 878 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 DDX18Q9NVP1 670 aaKnown RBP10.83□□□□□ -0.68
VPS52-217ENST00000478934 GALPQ9UBC7 116 aa10.83□□□□□ -0.68
VPS52-217ENST00000478934 PRPF19Q9UMS4 504 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms