RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RUBCNLQ9H714 662 aa12.25□□□□□ -0.45
HDAC8-217ENST00000478743 POPDC2Q9HBU9 364 aa12.25□□□□□ -0.45
HDAC8-217ENST00000478743 ATP13A1Q9HD20 1204 aa12.25□□□□□ -0.45
HDAC8-217ENST00000478743 COPG2Q9UBF2 871 aa12.25□□□□□ -0.45
HDAC8-217ENST00000478743 SLC12A6Q9UHW9 1150 aa12.25□□□□□ -0.45
HDAC8-217ENST00000478743 TRBV23OR9-2A0A075B6M9 112 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 A6NL46 340 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 INSIG1O15503 277 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 DRD2P14416 443 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 GM2AP17900 193 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 TFE3P19532 575 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-217ENST00000478743 MAN1A1P33908 653 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 FOXM1Q08050 763 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 LRMPQ12912 555 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 NME3Q13232 169 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 CNGA2Q16280 664 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 UGT8Q16880 541 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 FAM69BQ5VUD6 431 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 DENND1BQ6P3S1 775 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 GDPD4Q6W3E5 623 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 LYSMD3Q7Z3D4 306 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 SETD3Q86TU7 594 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-217ENST00000478743 FJX1Q86VR8 437 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 OR2AP1Q8NGE2 309 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 STAMBPL1Q96FJ0 436 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 FAXDC2Q96IV6 333 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 LRRC27Q9C0I9 530 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-217ENST00000478743 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
HDAC8-217ENST00000478743 NDFIP2Q9NV92 336 aa12.24□□□□□ -0.45
HDAC8-217ENST00000478743 ZGRF1Q86YA3 2104 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 CACNB4O00305 520 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 PDXKO00764 312 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 ZNF185O15231 689 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 GRAP2O75791 330 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 PIGNO95427 931 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 EML2O95834 649 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 NR2F2P24468 414 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 VARSP26640 1264 aaKnown RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 GPD2P43304 727 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 PPM1FP49593 454 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 LIG3P49916 1009 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 GFERP55789 205 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 PER3P56645 1201 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 BIRC2Q13490 618 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 MYLK3Q32MK0 819 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 RETSATQ6NUM9 610 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 ZSWIM9Q86XI8 627 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 GLIS1Q8NBF1 620 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 ARHGEF2Q92974 986 aaKnown RBP12.23□□□□□ -0.45
HDAC8-217ENST00000478743 SLC2A13Q96QE2 648 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 DPYSL5Q9BPU6 564 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 PCDH12Q9NPG4 1184 aa12.23□□□□□ -0.45
HDAC8-217ENST00000478743 TNFRSF10CO14798 259 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 MAPK13O15264 365 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 NDUFA10O95299 355 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 COX6B1P14854 86 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 OR1E1P30953 314 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 GNPDA1P46926 289 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 YWHAZP63104 245 aaKnown RBP12.22□□□□□ -0.45
HDAC8-217ENST00000478743 GPLD1P80108 840 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 CTBSQ01459 385 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 SRSF11Q05519 484 aaKnown RBP12.22□□□□□ -0.45
HDAC8-217ENST00000478743 SMTNL2Q2TAL5 461 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 ANO6Q4KMQ2 910 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 RHOT1Q8IXI2 618 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 ST6GALNAC3Q8NDV1 305 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 SLC37A2Q8TED4 501 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
HDAC8-217ENST00000478743 NCSTNQ92542 709 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
HDAC8-217ENST00000478743 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 BRD8Q9H0E9 1235 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 LATS2Q9NRM7 1088 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 SERTAD1Q9UHV2 236 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 LNPEPQ9UIQ6 1025 aa12.22□□□□□ -0.45
HDAC8-217ENST00000478743 ACANP16112 2415 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 DRGXA6NNA5 263 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 C19orf84I3L1E1 186 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 BUB1BO60566 1050 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-217ENST00000478743 RECKO95980 971 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 GSRP00390 522 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 CEACAM5P06731 702 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 PAEPP09466 180 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 SLC2A3P11169 496 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 KRT13P13646 458 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 BPIP17213 487 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 GTF2H1P32780 548 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 MMP12P39900 470 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 STAT1P42224 750 aa12.21□□□□□ -0.45
HDAC8-217ENST00000478743 MAPK9P45984 424 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms