RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 POLE2P56282 527 aa5□□□□□ -1.61
VPS50-214ENST00000477935 BLMHQ13867 455 aa5□□□□□ -1.61
VPS50-214ENST00000477935 RALBP1Q15311 655 aa5□□□□□ -1.61
VPS50-214ENST00000477935 TTC22Q5TAA0 569 aa5□□□□□ -1.61
VPS50-214ENST00000477935 RAB11FIP2Q7L804 512 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ATG9AQ7Z3C6 839 aa5□□□□□ -1.61
VPS50-214ENST00000477935 TECPR1Q7Z6L1 1165 aa5□□□□□ -1.61
VPS50-214ENST00000477935 TMCO2Q7Z6W1 182 aaPredicted RBP5□□□□□ -1.61
VPS50-214ENST00000477935 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
VPS50-214ENST00000477935 CCDC105Q8IYK2 499 aa5□□□□□ -1.61
VPS50-214ENST00000477935 MMP21Q8N119 569 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ANKRD44Q8N8A2 993 aa5□□□□□ -1.61
VPS50-214ENST00000477935 SPATA5Q8NB90 893 aa5□□□□□ -1.61
VPS50-214ENST00000477935 SCAMP5Q8TAC9 235 aa5□□□□□ -1.61
VPS50-214ENST00000477935 SECISBP2LQ93073 1101 aaKnown RBP5□□□□□ -1.61
VPS50-214ENST00000477935 ATP2A3Q93084 1043 aa5□□□□□ -1.61
VPS50-214ENST00000477935 YME1L1Q96TA2 773 aa5□□□□□ -1.61
VPS50-214ENST00000477935 SORBS1Q9BX66 1292 aaKnown RBP5□□□□□ -1.61
VPS50-214ENST00000477935 BRD8Q9H0E9 1235 aa5□□□□□ -1.61
VPS50-214ENST00000477935 PABPC3Q9H361 631 aaKnown RBP5□□□□□ -1.61
VPS50-214ENST00000477935 ELAC1Q9H777 363 aaKnown RBP5□□□□□ -1.61
VPS50-214ENST00000477935 VCPKMTQ9H867 229 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ZBTB40Q9NUA8 1239 aa5□□□□□ -1.61
VPS50-214ENST00000477935 AATFQ9NY61 560 aaKnown RBP eCLIP5□□□□□ -1.61
VPS50-214ENST00000477935 UTS2RQ9UKP6 389 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ANGPTL2Q9UKU9 493 aa5□□□□□ -1.61
VPS50-214ENST00000477935 PCDHA12Q9UN75 941 aa5□□□□□ -1.61
VPS50-214ENST00000477935 LZTS1Q9Y250 596 aa5□□□□□ -1.61
VPS50-214ENST00000477935 FRYLO94915 3013 aa5□□□□□ -1.61
VPS50-214ENST00000477935 ASTN1O14525 1302 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 MYH2Q9UKX2 1941 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 MYO7AQ13402 2215 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 A0A1W2PRG0 241 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 DPPA5A6NC42 116 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 AGAP5A6NIR3 686 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 EFCAB8A8MWE9 144 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 TULP3O75386 442 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 PSG1P11464 419 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 AOC1P19801 751 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 TNFRSF1BP20333 461 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 KRTAP1-1Q07627 177 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 GPNMBQ14956 572 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 SMTNL2Q2TAL5 461 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 CCDC38Q502W7 563 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 NAA16Q6N069 864 aaPredicted RBP4.99□□□□□ -1.61
VPS50-214ENST00000477935 TMED8Q6PL24 325 aaPredicted RBP4.99□□□□□ -1.61
VPS50-214ENST00000477935 COLCA1Q6ZS62 124 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 TMEM179Q6ZVK1 233 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 LRRC8DQ7L1W4 858 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 MDGA2Q7Z553 956 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 CCDC117Q8IWD4 279 aaPredicted RBP4.99□□□□□ -1.61
VPS50-214ENST00000477935 DDIASQ8IXT1 998 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 CACNA2D3Q8IZS8 1091 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 STT3BQ8TCJ2 826 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 SUSD6Q92537 303 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 KAT2AQ92830 837 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 TOP1MTQ969P6 601 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 EME1Q96AY2 570 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 MSI2Q96DH6 328 aaKnown RBP4.99□□□□□ -1.61
VPS50-214ENST00000477935 TMEM120AQ9BXJ8 343 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 AAMDCQ9H7C9 122 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 C19orf53Q9UNZ5 99 aaPredicted RBP4.99□□□□□ -1.61
VPS50-214ENST00000477935 LAMP3Q9UQV4 416 aa4.99□□□□□ -1.61
VPS50-214ENST00000477935 ATAD5Q96QE3 1844 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 MPHOSPH10O00566 681 aaKnown RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 ZBED4O75132 1171 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 HEXIM1O94992 359 aaKnown RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 NFATC1O95644 943 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 PROS1P07225 676 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 FGF2P09038 288 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 CIITAP33076 1130 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 SHMT1P34896 483 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 RFX5P48382 616 aaPredicted RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 ALDH7A1P49419 539 aaKnown RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 RCAN1P53805 252 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 TIMM10P62072 90 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 TRIM14Q14142 442 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 RPS6KA2Q15349 733 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 PTGISQ16647 500 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 GALNTL6Q49A17 601 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 DUSP28Q4G0W2 176 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 ISM2Q6H9L7 571 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 SNRNP48Q6IEG0 339 aaKnown RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 CYB5R4Q7L1T6 521 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 PIM3Q86V86 326 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 MYOCDQ8IZQ8 938 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 CPT1BQ92523 772 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 ADAD1Q96M93 576 aaKnown RBP4.98□□□□□ -1.61
VPS50-214ENST00000477935 HMG20BQ9P0W2 317 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 PCDHA10Q9Y5I2 948 aa4.98□□□□□ -1.61
VPS50-214ENST00000477935 RAD50Q92878 1312 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 GCN1Q92616 2671 aaKnown RBP4.97□□□□□ -1.61
VPS50-214ENST00000477935 LOC102724159A0A0B4J2E5 919 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 IGLV5-39A0A0G2JS06 123 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 CXorf65A6NEN9 183 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 MYMKA6NI61 221 aa4.97□□□□□ -1.61
VPS50-214ENST00000477935 MCIDASD6RGH6 385 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms