RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 THPOP40225 353 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 CRYBB1P53674 252 aaPredicted RBP9.8□□□□□ -0.84
CMC1-209ENST00000477739 ZNF235Q14590 738 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 TAF12Q16514 161 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 FSCN1Q16658 493 aaKnown RBP9.8□□□□□ -0.84
CMC1-209ENST00000477739 ZRANB3Q5FWF4 1079 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 GRAMD4Q6IC98 578 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 RTP4Q96DX8 246 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 OLFM1Q99784 485 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 NAT9Q9BTE0 207 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 KATNAL1Q9BW62 490 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 FAM124BQ9H5Z6 455 aaPredicted RBP9.8□□□□□ -0.84
CMC1-209ENST00000477739 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 PNPLA8Q9NP80 782 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 CRTAC1Q9NQ79 661 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 SLC38A7Q9NVC3 462 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 CD274Q9NZQ7 290 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 ZNHIT2Q9UHR6 403 aa9.8□□□□□ -0.84
CMC1-209ENST00000477739 URB1O60287 2271 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 A0A0J9YYE9 177 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 E5RI56 91 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 H3BNX3 289 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 EI24O14681 340 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 NOBOXO60393 691 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 YBX1P67809 324 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 SLC10A7Q0GE19 358 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ITGADQ13349 1161 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 GRB7Q14451 532 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 TMEM26Q6ZUK4 368 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 C14orf80Q86SX3 495 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SPATA2LQ8IUW3 424 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 ATAD1Q8NBU5 361 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 IL22Q9GZX6 179 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 RHOJQ9H4E5 214 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 DNAJC28Q9NX36 388 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MARCH4Q9P2E8 410 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 ST3GAL5Q9UNP4 418 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MYRFQ9Y2G1 1151 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 TRAF6Q9Y4K3 522 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ASCC3Q8N3C0 2202 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 GLTPD2A6NH11 291 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 BTN3A1O00481 513 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 PIP5K1BO14986 540 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 TOMM70O94826 608 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 IL10P22301 178 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ARSDP51689 593 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 DGKEP52429 567 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MTPNP58546 118 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 STX5Q13190 355 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 DDX39BQ13838 428 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 GTF2H3Q13889 308 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 AP5B1Q2VPB7 878 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MGAT5BQ3V5L5 792 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SLC39A12Q504Y0 691 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ARMC12Q5T9G4 340 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 KIAA0319Q5VV43 1072 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 C16orf59Q7L2K0 433 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 RAB44Q7Z6P3 723 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 ABI1Q8IZP0 508 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 CENPLQ8N0S6 344 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 TOP6BLQ8N6T0 577 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 RP9Q8TA86 221 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 PSMG2Q969U7 264 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SMOQ99835 787 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SLAMF8Q9P0V8 285 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SUN2Q9UH99 717 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 PNMA8BQ9ULN7 279 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 RNF112Q9ULX5 631 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 COMMD3-BMI1R4GMX3 469 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 SOCS2O14508 198 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 CCNT2O60583 730 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 SNX2O60749 519 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 C1QAP02745 245 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 SNRPB2P08579 225 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 PCSK1P29120 753 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 AGTR2P50052 363 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 NDST2P52849 883 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 AAK1Q2M2I8 961 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 AGAP9Q5VTM2 703 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 LINGO4Q6UY18 593 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 GALNT5Q7Z7M9 940 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 C11orf74Q86VG3 221 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 FNDC5Q8NAU1 212 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 DQX1Q8TE96 717 aaKnown RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 GIPC3Q8TF64 312 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 C3orf30Q96M34 536 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 FAM105AQ9NUU6 356 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 GDAP2Q9NXN4 497 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.79□□□□□ -0.84
CMC1-209ENST00000477739 MID2Q9UJV3 735 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 ANGPTL3Q9Y5C1 460 aa9.79□□□□□ -0.84
CMC1-209ENST00000477739 CNTN5O94779 1100 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 MPOP05164 745 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms