RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 SLC26A2P50443 739 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 FOXA1P55317 472 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 CTBSQ01459 385 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 DHRSXQ8N5I4 330 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 HDAC10Q969S8 669 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 SUCOQ9UBS9 1254 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 NDUFAF1Q9Y375 327 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 RBMX2Q9Y388 322 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 MAGED1Q9Y5V3 778 aaPredicted RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 PTGES3LE9PB15 166 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 NME4O00746 187 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 FYNP06241 537 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 CYP2C9P11712 490 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 IMPG1Q17R60 797 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 CMTR2Q8IYT2 770 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 PTGR2Q8N8N7 351 aaPredicted RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 SMYD1Q8NB12 490 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 NUDT8Q8WV74 236 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 C19orf60Q96EN9 201 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 DUS2Q9NX74 493 aaKnown RBP12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 TRHDEQ9UKU6 1024 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 FAM50BQ9Y247 325 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 SH3GLB1Q9Y371 365 aa12.11□□□□□ -0.47
SKIV2L-208ENST00000474839 UBFD1O14562 309 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 DIO3P55073 304 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 ZC3H7AQ8IWR0 971 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 BLOC1S5Q8TDH9 187 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 CCDC138Q96M89 665 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 SLC2A11Q9BYW1 496 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 FBXW11Q9UKB1 542 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 AAR2Q9Y312 384 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 WDR81Q562E7 1941 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 UBXN8O00124 270 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 KPNA6O60684 536 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 LTA4HP09960 611 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 HMOX2P30519 316 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 TXNL4AP83876 142 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 RAB39AQ14964 217 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 CRYBG2Q8N1P7 616 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 SCAMP5Q8TAC9 235 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 LPPQ93052 612 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 PCED1BQ96HM7 432 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 EXD2Q9NVH0 621 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 RCOR3Q9P2K3 495 aaPredicted RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 ZNF510Q9Y2H8 683 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 ALDOCP09972 364 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 EEF1DP29692 281 aaKnown RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 CLCN2P51788 898 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 NR1D2Q14995 579 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 CARTPTQ16568 116 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 NHSL2Q5HYW2 709 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 KIAA0319Q5VV43 1072 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 KCTD11Q693B1 232 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 CDCA5Q96FF9 252 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 GPR78Q96P69 363 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 FANCEQ9HB96 536 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 PCDH12Q9NPG4 1184 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 TMEM30AQ9NV96 361 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 SLAMF8Q9P0V8 285 aa12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
SKIV2L-208ENST00000474839 HMBSP08397 361 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 NFKBIAP25963 317 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 CCR1P32246 355 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 CD86P42081 329 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 HERC3Q15034 1050 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 PAQR9Q6ZVX9 377 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 STK32CQ86UX6 486 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 GPR180Q86V85 440 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 ERO1BQ86YB8 467 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 LRRC52Q8N7C0 313 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 TFAP2CQ92754 450 aa12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
SKIV2L-208ENST00000474839 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms