RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SLC43A3Q8NBI5 491 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 XXYLT1Q8NBI6 393 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 FBXL13Q8NEE6 735 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 BRSK1Q8TDC3 778 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SREK1Q8WXA9 508 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 AIFM2Q9BRQ8 373 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CHST8Q9H2A9 424 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 WDR41Q9HAD4 459 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 XPNPEP3Q9NQH7 507 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PRDM8Q9NQV8 689 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ABI2Q9NYB9 513 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 NUP50Q9UKX7 468 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PRR12Q9ULL5 1215 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TBX20Q9UMR3 447 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 RABGAP1Q9Y3P9 1069 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 PCDHGB2Q9Y5G2 931 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 A0A0C4DFX4 3053 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 DFNA5O60443 496 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 FGF18O76093 207 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 LGI1O95970 557 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 CCNE2O96020 404 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 UMPSP11172 480 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 AKR1B1P15121 316 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ITPKAP23677 461 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ITGB7P26010 798 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SSTR3P32745 418 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 GRK5P34947 590 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 MLLT3P42568 568 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 EPHA4P54764 986 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 EFNB1P98172 346 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ILF2Q12905 390 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 EIF2B5Q13144 721 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 SNRNP35Q16560 246 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 AASDHQ4L235 1098 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 ZNF618Q5T7W0 954 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 AFMIDQ63HM1 303 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TTBK2Q6IQ55 1244 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GALNT18Q6P9A2 607 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 RALGPS2Q86X27 583 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 Q8N9G6 341 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 RNF169Q8NCN4 708 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SLC26A7Q8TE54 656 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TFAP2BQ92481 460 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP16-205ENST00000474835 DCPSQ96C86 337 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 CDRT15Q96T59 188 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GPR20Q99678 358 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SARGQ9BW04 601 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GSTO2Q9H4Y5 243 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 SDR39U1Q9NRG7 319 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 MARK1Q9P0L2 795 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 GMPR2Q9P2T1 348 aaKnown RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 UBA2Q9UBT2 640 aaPredicted RBP4.12□□□□□ -1.75
USP16-205ENST00000474835 DNMT3LQ9UJW3 386 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 DOLKQ9UPQ8 538 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 HES2Q9Y543 173 aa4.12□□□□□ -1.75
USP16-205ENST00000474835 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 USP17L10C9JJH3 530 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SLCO1B7G3V0H7 640 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GNPATO15228 680 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SYNCRIPO60506 623 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 CHRNA1P02708 482 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LTFP02788 710 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ODC1P11926 461 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 HK1P19367 917 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LIMS1P48059 325 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PRIM2P49643 509 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KCNQ4P56696 695 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PSME3P61289 254 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ECT2LQ008S8 904 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PRKCEQ02156 737 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KEAP1Q14145 624 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 RCAN2Q14206 197 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TARBP2Q15633 366 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 NXNL2Q5VZ03 156 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ABRAXAS1Q6UWZ7 409 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NANOGNBQ7Z5D8 188 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TSEN54Q7Z6J9 526 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 CBWD2Q8IUF1 395 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CRLF3Q8IUI8 442 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CLVS1Q8IUQ0 354 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
USP16-205ENST00000474835 FAM47BQ8NA70 645 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 DUSP18Q8NEJ0 188 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 WDR48Q8TAF3 677 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GIPC2Q8TF65 315 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 BTN2A2Q8WVV5 523 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 RCN3Q96D15 328 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF419Q96HQ0 510 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 FBXL20Q96IG2 436 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MRGPRX2Q96LB1 330 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CDK5RAP1Q96SZ6 601 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 ACOX2Q99424 681 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GATA5Q9BWX5 397 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 GABARAPL3Q9BY60 117 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MTMR12Q9C0I1 747 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 DSN1Q9H410 356 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZHX3Q9H4I2 956 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NEK6Q9HC98 313 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms