RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ATXN1LP0C7T5 689 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 AKT2P31751 481 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 ID4P47928 161 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 WNT3AP56704 352 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 PFN3P60673 137 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 FAM193AP78312 1265 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 LMNB2Q03252 620 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 TEAD4Q15561 434 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 LONRF2Q1L5Z9 754 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 CRTC1Q6UUV9 634 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 KYAT3Q6YP21 454 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 TECPR1Q7Z6L1 1165 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 CCDC110Q8TBZ0 833 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 PDCD6IPQ8WUM4 868 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 SNX19Q92543 992 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 SRPK1Q96SB4 655 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 NAP1L3Q99457 506 aaPredicted RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 MLPHQ9BV36 600 aaPredicted RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 MIR1-1HGQ9H1L0 117 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 ARNT2Q9HBZ2 717 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 MAGEE1Q9HCI5 957 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 RXFP3Q9NSD7 469 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 RSPH14Q9UHP6 348 aa16.98■□□□□ 0.31
SCAF11-206ENST00000474828 AAR2Q9Y312 384 aaKnown RBP16.98■□□□□ 0.31
SCAF11-206ENST00000474828 TRPM6Q9BX84 2022 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 SLC31A1O15431 190 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 SYPP08247 313 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 ENGP17813 658 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 CSNK1EP49674 416 aaKnown RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 STC1P52823 247 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 GEMP55040 296 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 NXPH1P58417 271 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 ETF1P62495 437 aaKnown RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 PTSQ03393 145 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 GRIK2Q13002 908 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 SGCGQ13326 291 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 MSLNQ13421 630 aaPredicted RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 PTPRRQ15256 657 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 WSCD2Q2TBF2 565 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 NYAP1Q6ZVC0 841 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 ADAT2Q7Z6V5 191 aaKnown RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 MS4A14Q96JA4 679 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 WRAP53Q9BUR4 548 aaKnown RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 C1QTNF7Q9BXJ2 289 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 DNAAF2Q9NVR5 837 aaKnown RBP16.97■□□□□ 0.31
SCAF11-206ENST00000474828 ANKRD6Q9Y2G4 727 aa16.97■□□□□ 0.31
SCAF11-206ENST00000474828 SPTBN4Q9H254 2564 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 RGSL1A5PLK6 1076 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 POM121BA6NF01 834 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 TLR4O00206 839 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 PGRMC1O00264 195 aaKnown RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 MAGEC1O60732 1142 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 PMPCBO75439 489 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 RECQL5O94762 991 aaPredicted RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 METTL18O95568 372 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 HOXC4P09017 264 aaPredicted RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ALPIP09923 528 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ELFN1P0C7U0 828 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ZNF883P0CG24 379 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 HLA-DPA1P20036 260 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 PSMB4P28070 264 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 TEAD1P28347 426 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 TRIM23P36406 574 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 YPEL5P62699 121 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ARHGAP8P85298 464 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 DPTQ07507 201 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 STAT4Q14765 748 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 SLC1A5Q15758 541 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 IL27RAQ6UWB1 636 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 TSPAN33Q86UF1 283 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 DCP2Q8IU60 420 aaKnown RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 CREG2Q8IUH2 290 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 LPCAT1Q8NF37 534 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 KLK6Q92876 244 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 SKA1Q96BD8 255 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 EID2BQ96D98 161 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 DTD2Q96FN9 168 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 IFT43Q96FT9 208 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 SMIM14Q96QK8 99 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 NAPGQ99747 312 aaPredicted RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 C19orf43Q9BQ61 176 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 NFKBIL1Q9UBC1 381 aaPredicted RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 ZNF148Q9UQR1 794 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.96■□□□□ 0.31
SCAF11-206ENST00000474828 DNAH14Q0VDD8 3507 aa16.96■□□□□ 0.31
SCAF11-206ENST00000474828 PI4KAP42356 2102 aa16.96■□□□□ 0.3
SCAF11-206ENST00000474828 LRRK1Q38SD2 2015 aa16.96■□□□□ 0.3
SCAF11-206ENST00000474828 DOCK9Q9BZ29 2069 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 A6NNZ2 444 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 TM4SF5O14894 197 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 CFIP05156 583 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 CTPS1P17812 591 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 IGFALSP35858 605 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 SEMG2Q02383 582 aa16.95■□□□□ 0.3
SCAF11-206ENST00000474828 LRRC14Q15048 493 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms