RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 AP1S2P56377 157 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 CHRNB3Q05901 458 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 STX4Q12846 297 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SMAD4Q13485 552 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DPYSQ14117 519 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 LPIN1Q14693 890 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 NR1D2Q14995 579 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TAF1AQ15573 450 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 FAM189A2Q15884 450 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ADRM1Q16186 407 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 EPC2Q52LR7 807 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 HABP4Q5JVS0 413 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 FAAH2Q6GMR7 532 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ERICH5Q6P6B1 374 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 LRRTM4Q86VH4 590 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TCEAL8Q8IYN2 117 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 OR4L1Q8NH43 312 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ACTL9Q8TC94 416 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DQX1Q8TE96 717 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 LCN9Q8WX39 176 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TRIB3Q96RU7 358 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 NDC1Q9BTX1 674 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF717Q9BY31 904 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 UGT2B28Q9BY64 529 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 CCDC177Q9NQR7 707 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 RYDENQ9NUL5 291 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SPATS2LQ9NUQ6 558 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 PHF11Q9UIL8 331 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ACTL7BQ9Y614 415 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 A0A0G2JND7 137 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 GABRDO14764 452 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 KHNYNO15037 678 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 MGRN1O60291 552 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SERPINE1P05121 402 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ENO1P06733 434 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 GALTP07902 379 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ZNF865P0CJ78 1059 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SHMT2P34897 504 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 PIK3CBP42338 1070 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TOB1P50616 345 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ABATP80404 500 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ACY1Q03154 408 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 CASP8Q14790 479 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 CYTH1Q15438 398 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SNCBQ16143 134 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DDR2Q16832 855 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 FAM26DQ5JW98 314 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TTC23Q5W5X9 447 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 EEF1DP3Q658K8 133 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 KLHL24Q6TFL4 600 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ARCQ7LC44 396 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 GALNT7Q86SF2 657 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM156Q8N614 296 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 UHMK1Q8TAS1 419 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DACT3Q96B18 629 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 FAM120BQ96EK7 910 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 C1orf74Q96LT6 269 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM74Q96NL1 305 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 CDC6Q99741 560 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM121Q9BTD3 319 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA9Q9BWV2 254 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 TAPBPLQ9BX59 468 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 PACSIN1Q9BY11 444 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 ZCWPW1Q9H0M4 648 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 PCED1AQ9H1Q7 454 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SMOC2Q9H3U7 446 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SRMSQ9H3Y6 488 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SCHIP1Q9P0W5 487 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 PRKAG3Q9UGI9 489 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 OGDHLQ9ULD0 1010 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 KLHL20Q9Y2M5 609 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 SLC27A5Q9Y2P5 690 aa4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 DNMT3AQ9Y6K1 912 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-215ENST00000474539 IGLV3-22A0A075B6J6 115 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 LRRC10BA6NIK2 292 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 GTPBP1O00178 669 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 B3GALT2O43825 422 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TRIM13O60858 407 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 TMCC2O75069 709 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ATP9AO75110 1047 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 LRCH4O75427 683 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 STX11O75558 287 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 USP1O94782 785 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EPN2O95208 641 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 DLDP09622 509 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ICAM2P13598 275 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CPA3P15088 417 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 PAICSP22234 425 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 EEF1B2P24534 225 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ATP5F1P24539 256 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 NTSR1P30989 418 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CDH5P33151 784 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 S100A3P33764 101 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 CXCL12P48061 93 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 MASP1P48740 699 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ARSFP54793 590 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 ACTR1AP61163 376 aa4.62□□□□□ -1.67
CCNL1-215ENST00000474539 RPS15P62841 145 aaKnown RBP4.62□□□□□ -1.67
CCNL1-215ENST00000474539 NOMO3P69849 1222 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms