RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 BHLHE23Q8NDY6 225 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 OR52E1Q8NGJ3 308 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NCOA7Q8NI08 942 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 WDR48Q8TAF3 677 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PLEKHO2Q8TD55 490 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 THRSPQ92748 146 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 KAT2AQ92830 837 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PHKBQ93100 1093 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TEX12Q9BXU0 123 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZNF717Q9BY31 904 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 FTOQ9C0B1 505 aaKnown RBP eCLIP3.5□□□□□ -1.85
UBR3-208ENST00000474426 MTIF3Q9H2K0 278 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 PDZD7Q9H5P4 517 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EXO5Q9H790 373 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MAGEE1Q9HCI5 957 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ASCL3Q9NQ33 180 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 STMN3Q9NZ72 180 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NUP50Q9UKX7 468 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC9A8Q9Y2E8 581 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MFHAS1Q9Y4C4 1052 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PCDHA1Q9Y5I3 950 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PSAT1Q9Y617 370 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 IFT140Q96RY7 1462 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ANKRD36BQ8N2N9 1353 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CDHR2Q9BYE9 1310 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EFCAB10A6NFE3 127 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 RHPN2P1A8MT19 583 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TSPAN4O14817 238 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC22A1O15245 554 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ABCB7O75027 752 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SRCP12931 536 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 HNRNPA2B1P22626 353 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 PHBP35232 272 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 BCAP31P51572 246 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PRSS12P56730 875 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 VAMP2P63027 116 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ELF3P78545 371 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZNF628Q5EBL2 1059 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ERMARDQ5T6L9 678 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PYHIN1Q6K0P9 492 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TMEM270Q6UE05 265 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 BHLHA15Q7RTS1 189 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 DDX53Q86TM3 631 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 CUZD1Q86UP6 607 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 WDR5BQ86VZ2 330 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 LSRQ86X29 649 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 METTL23Q86XA0 190 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 FNDC5Q8NAU1 212 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 BPIFCQ8NFQ6 507 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 OR6J1Q8NGC5 347 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC7A14Q8TBB6 771 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CD300LFQ8TDQ1 290 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GLMPQ8WWB7 406 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ING5Q8WYH8 240 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 DVL3Q92997 716 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 EME1Q96AY2 570 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 C9orf72Q96LT7 481 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PPP1R2P1Q96PQ5 205 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CCNL2Q96S94 520 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 CNPY3Q9BT09 278 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 DSCC1Q9BVC3 393 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 IDI2Q9BXS1 227 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TMEM60Q9H2L4 133 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CHST11Q9NPF2 352 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 C14orf119Q9NWQ9 140 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NDOR1Q9UHB4 597 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SIK3Q9Y2K2 1263 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 USP15Q9Y4E8 981 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 INSL6Q9Y581 213 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 AP4B1Q9Y6B7 739 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PARD3Q8TEW0 1356 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PLEKHH1Q9ULM0 1364 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SH3PXD2BA1X283 911 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC22A31A6NKX4 558 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SOBPA7XYQ1 873 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 RBAK-RBAKDNI3L0D1 243 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 DHX15O43143 795 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 EIF1BO60739 113 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 GABBR2O75899 941 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZNF202O95125 648 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MBP02144 154 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CSF2P04141 144 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PLA2G4BP0C869 781 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 JMJD7P0C870 316 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MAGP20916 626 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 BMP6P22004 513 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EPHB2P29323 1055 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SERPINF1P36955 418 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CD79BP40259 229 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EIF1P41567 113 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC1A6P48664 564 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 HSPA7P48741 367 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ALDH9A1P49189 494 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 HOXA1P49639 335 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 HNRNPFP52597 415 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 NDST2P52849 883 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SUCLG1P53597 346 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 GHRHRQ02643 423 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GPR176Q14439 515 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 INPP5AQ14642 412 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms