RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CCNL2Q96S94 520 aaPredicted RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 GULP1Q9UBP9 304 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 COQ6Q9Y2Z9 468 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 PPIL1Q9Y3C6 166 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 OR1A2Q9Y585 309 aa13.59□□□□□ -0.23
CHD3-209ENST00000473376 BZW2Q9Y6E2 419 aaKnown RBP13.59□□□□□ -0.23
CHD3-209ENST00000473376 A0A1W2PQM1 296 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 H3BRJ5 948 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 LRCH4O75427 683 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 MYCLP1P12525 358 aaPredicted RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 CR2P20023 1033 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 RGRP47804 291 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 SCNN1BP51168 640 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CCL7P80098 99 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CLN3Q13286 438 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 PIGHQ14442 188 aaPredicted RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 HLTFQ14527 1009 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHD3-209ENST00000473376 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 NR1D2Q14995 579 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CA9Q16790 459 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 C14orf28Q4W4Y0 310 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 ARHGAP40Q5TG30 622 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CCNJLQ8IV13 435 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 FBXO39Q8N4B4 442 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 NPWQ8N729 165 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 GPBAR1Q8TDU6 330 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 TEKT4Q8WW24 435 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 COQ10AQ96MF6 247 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 PEBP4Q96S96 227 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 MGME1Q9BQP7 344 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 TEX101Q9BY14 249 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 HAUS4Q9H6D7 363 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 WDR26Q9H7D7 661 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CPNE5Q9HCH3 593 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 RCOR3Q9P2K3 495 aaPredicted RBP13.58□□□□□ -0.24
CHD3-209ENST00000473376 PHTF1Q9UMS5 762 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 CFAP46Q8IYW2 2715 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 RP1P56715 2156 aa13.58□□□□□ -0.24
CHD3-209ENST00000473376 TMEM202A6NGA9 273 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 LRRC53A6NM62 1247 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 NOBOXO60393 691 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PEX11BO96011 259 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PCCBP05166 539 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 RPLP0P05388 317 aaKnown RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 PYGLP06737 847 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 CELA2BP08218 269 aaPredicted RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 KRT10P13645 584 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PLA2G2AP14555 144 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 GM2AP17900 193 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 CES1P23141 567 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 SERPINB6P35237 376 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 UGT1A5P35504 534 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 ARL4AP40617 200 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 GPR3P46089 330 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 CDH6P55285 790 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 DPTQ07507 201 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 ASIC2Q16515 512 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 RD3Q7Z3Z2 195 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 ZNF438Q7Z4V0 828 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 POLNQ7Z5Q5 900 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 NIPA2Q8N8Q9 360 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PLA2G15Q8NCC3 412 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 FAM46DQ8NEK8 389 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 OR1E3Q8WZA6 343 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 SYN2Q92777 582 aaPredicted RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 FATE1Q969F0 183 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 SCRN2Q96FV2 425 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 MED8Q96G25 268 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PDXPQ96GD0 296 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 CMKLR1Q99788 373 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 FGF22Q9HCT0 170 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PHPT1Q9NRX4 125 aaPredicted RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 GPATCH2LQ9NWQ4 482 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 CNOT8Q9UFF9 292 aaKnown RBP13.57□□□□□ -0.24
CHD3-209ENST00000473376 PCSK1NQ9UHG2 260 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 RABGEF1Q9UJ41 708 aa13.57□□□□□ -0.24
CHD3-209ENST00000473376 PRSS38A1L453 326 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.56□□□□□ -0.24
CHD3-209ENST00000473376 DFFAO00273 331 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 TEX33O43247 280 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 MAFKO60675 156 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 HEXIM1O94992 359 aaKnown RBP13.56□□□□□ -0.24
CHD3-209ENST00000473376 PRB1P04280 392 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 ITGB2P05107 769 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
CHD3-209ENST00000473376 SLC5A2P31639 672 aa13.56□□□□□ -0.24
CHD3-209ENST00000473376 TYRO3Q06418 890 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms