RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	MTG2	Q9H4K7	406 aa		10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	BPIFA1	Q9NP55	256 aa		10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	NLE1	Q9NVX2	485 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SLC39A10	Q9ULF5	831 aa		10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SLC8A2	Q9UPR5	921 aa		10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ZNF711	Q9Y462	761 aa		10.8	□□□□□ -0.68
MRPS18B-208	ENST00000472267	WDR91	A4D1P6	747 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GMNC	A6NCL1	334 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267		A8MX80	341 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TRAFD1	O14545	582 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	STX7	O15400	261 aa	Known RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	HTRA2	O43464	458 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SIN3B	O75182	1162 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	HAUS5	O94927	633 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ASL	P04424	464 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	UGT2B4	P06133	528 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	DLD	P09622	509 aa	Known RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PSMC3	P17980	439 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GABRB3	P28472	473 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GDI1	P31150	447 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	LTBR	P36941	435 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CD151	P48509	253 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	NEK3	P51956	506 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SLC18A1	P54219	525 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ACVR1	Q04771	509 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FCHO2	Q0JRZ9	810 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RUNX3	Q13761	415 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CTC1	Q2NKJ3	1217 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PPM1J	Q5JR12	505 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	NAIF1	Q69YI7	327 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	LYSMD3	Q7Z3D4	306 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SLC41A1	Q8IVJ1	513 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TTC30B	Q8N4P2	665 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ZNF366	Q8N895	744 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GPATCH11	Q8N954	259 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ACVR1C	Q8NER5	493 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CKAP2	Q8WWK9	683 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FGF14	Q92915	247 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ELSPBP1	Q96BH3	223 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CDKN2AIPNL	Q96HQ2	116 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ELMO2	Q96JJ3	720 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FAM111A	Q96PZ2	611 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TUBGCP5	Q96RT8	1024 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SRPK1	Q96SB4	655 aa	Known RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RPP25	Q9BUL9	199 aa	Known RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	EPN3	Q9H201	632 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SUV39H2	Q9H5I1	410 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SNX15	Q9NRS6	342 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CATSPERZ	Q9NTU4	200 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ELOVL2	Q9NXB9	296 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GTSE1	Q9NYZ3	720 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	HACD3	Q9P035	362 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RIMKLB	Q9ULI2	386 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SLC27A6	Q9Y2P4	619 aa		10.79	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PRRT4	C9JH25	899 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TM9SF1	O15321	606 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CD3EAP	O15446	510 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ASMTL	O95671	621 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TOP3B	O95985	862 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SRPRA	P08240	638 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	VIM	P08670	466 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	HNF1B	P35680	557 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GMPR	P36959	345 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CCT5	P48643	541 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RPL26	P61254	145 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SEMG2	Q02383	582 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PDE1C	Q14123	709 aa	Predicted RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	USP10	Q14694	798 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PTPRN	Q16849	979 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FNDC3B	Q53EP0	1204 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ZNF789	Q5FWF6	425 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CNST	Q6PJW8	725 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	CDHR3	Q6ZTQ4	885 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RAPH1	Q70E73	1250 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ZSWIM9	Q86XI8	627 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	SFTPA1	Q8IWL2	248 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	OR2A12	Q8NGT7	310 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	OR4L1	Q8NH43	312 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	ACMSD	Q8TDX5	336 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FRS2	Q8WU20	508 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PEX13	Q92968	403 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	MSLNL	Q96KJ4	702 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	KLHL32	Q96NJ5	620 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GPR22	Q99680	433 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	HEPH	Q9BQS7	1158 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	MCMBP	Q9BTE3	642 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	MAGEE1	Q9HCI5	957 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FKBPL	Q9UIM3	349 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	GRID1	Q9ULK0	1009 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	RPL26L1	Q9UNX3	145 aa	Known RBP	10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	PLA2G4C	Q9UP65	541 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267	DENND4A	Q7Z401	1863 aa		10.78	□□□□□ -0.68
MRPS18B-208	ENST00000472267		A0A0J9YYE9	177 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	C1orf232	A0A0U1RR37	186 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	FAM95C	A0A1B0GW59	222 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TBC1D3B	A6NDS4	549 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TCP11X1	B4DZS4	312 aa		10.77	□□□□□ -0.68
MRPS18B-208	ENST00000472267	TRBC1	P01850	177 aa		10.77	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms