RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NUP85Q9BW27 656 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 PCDH18Q9HCL0 1135 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 ASCL3Q9NQ33 180 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 THSD1Q9NS62 852 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 B4GALT6Q9UBX8 382 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 IP6K2Q9UHH9 426 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 ANAPC7Q9UJX3 599 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 MGAQ8IWI9 3026 aa22.62■■□□□ 1.21
C9orf3-213ENST00000471978 A0A1W2PNU3 283 aaPredicted RBP22.61■■□□□ 1.21
C9orf3-213ENST00000471978 TMEM202A6NGA9 273 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 HTRA2O43464 458 aaPredicted RBP22.61■■□□□ 1.21
C9orf3-213ENST00000471978 MAFKO60675 156 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 GM2AP17900 193 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 CR2P20023 1033 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 ZBED6P86452 979 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 SLC25A11Q02978 314 aaKnown RBP22.61■■□□□ 1.21
C9orf3-213ENST00000471978 SPIDRQ14159 915 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 NFKBIBQ15653 356 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 BBS5Q8N3I7 341 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 PGBD5Q8N414 524 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 ATPAF2Q8N5M1 289 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 NSMCE1Q8WV22 266 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 OR1E3Q8WZA6 343 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 SPOCK2Q92563 424 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 NOD2Q9HC29 1040 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 CAPN11Q9UMQ6 739 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 LRP4O75096 1905 aa22.61■■□□□ 1.21
C9orf3-213ENST00000471978 A0A087X0T9 212 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 A0A1W2PQ67 120 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 SOCS5O75159 536 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 CYP1A2P05177 515 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 HOXC4P09017 264 aaPredicted RBP22.6■■□□□ 1.21
C9orf3-213ENST00000471978 FAM228BP0C875 321 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 KELP23276 732 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 RBMS1P29558 406 aaKnown RBP22.6■■□□□ 1.21
C9orf3-213ENST00000471978 SERPINB6P35237 376 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 TRIM23P36406 574 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 KRT81Q14533 505 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 IGF2-ASQ6U949 168 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 CCDC74AQ96AQ1 378 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 MGME1Q9BQP7 344 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 WDR26Q9H7D7 661 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 FGF22Q9HCT0 170 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 MRPL40Q9NQ50 206 aaKnown RBP22.6■■□□□ 1.21
C9orf3-213ENST00000471978 RABGEF1Q9UJ41 708 aa22.6■■□□□ 1.21
C9orf3-213ENST00000471978 TNFRSF10CO14798 259 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 CPP00450 1065 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 SSR1P43307 286 aaKnown RBP22.59■■□□□ 1.21
C9orf3-213ENST00000471978 CDH6P55285 790 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 MAXP61244 160 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 MARC1Q5VT66 337 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 PNCKQ6P2M8 343 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 FOXR1Q6PIV2 292 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 TAF8Q7Z7C8 310 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 IQCDQ96DY2 449 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 COQ10AQ96MF6 247 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 SLC46A1Q96NT5 459 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 LGR4Q9BXB1 951 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 LUC7L2Q9Y383 392 aaKnown RBP22.59■■□□□ 1.21
C9orf3-213ENST00000471978 PCDHGA8Q9Y5G5 932 aa22.59■■□□□ 1.21
C9orf3-213ENST00000471978 GOLGA6L19H0YKK7 550 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 MYO1FO00160 1098 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 NTN3O00634 580 aaPredicted RBP22.58■■□□□ 1.21
C9orf3-213ENST00000471978 NFKBIAP25963 317 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 VIPR1P32241 457 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 MMP13P45452 471 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 PDX1P52945 283 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 CXADRP78310 365 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 TRAF2Q12933 501 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 CNGA3Q16281 694 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 CCDC122Q5T0U0 273 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 BROXQ5VW32 411 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 DENND2CQ68D51 928 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 ALKBH5Q6P6C2 394 aaKnown RBP22.58■■□□□ 1.21
C9orf3-213ENST00000471978 GPR155Q7Z3F1 870 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 PELI3Q8N2H9 469 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 OR6C4Q8NGE1 309 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 WDR36Q8NI36 951 aaKnown RBP22.58■■□□□ 1.21
C9orf3-213ENST00000471978 KCNE4Q8WWG9 221 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 NUS1Q96E22 293 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 MOSPD1Q9UJG1 213 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 PHTF1Q9UMS5 762 aa22.58■■□□□ 1.21
C9orf3-213ENST00000471978 GCN1Q92616 2671 aaKnown RBP22.57■■□□□ 1.2
C9orf3-213ENST00000471978 PMS2P1A4D2B8 440 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 HEXIM1O94992 359 aaKnown RBP22.57■■□□□ 1.2
C9orf3-213ENST00000471978 IL4RP24394 825 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 CCL7P80098 99 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 MMRN1Q13201 1228 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 RALGPS1Q5JS13 557 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 FAM46DQ8NEK8 389 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 GPR156Q8NFN8 814 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 PRR11Q96HE9 360 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-213ENST00000471978 GFM1Q96RP9 751 aaKnown RBP22.57■■□□□ 1.2
C9orf3-213ENST00000471978 TMEM168Q9H0V1 697 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 CYP4F12Q9HCS2 524 aa22.57■■□□□ 1.2
C9orf3-213ENST00000471978 RCOR3Q9P2K3 495 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-213ENST00000471978 ATMQ13315 3056 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 CCDC187A0A096LP49 1063 aa22.56■■□□□ 1.2
C9orf3-213ENST00000471978 PDE2AO00408 941 aaPredicted RBP22.56■■□□□ 1.2
C9orf3-213ENST00000471978 GYPCP04921 128 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms